RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 USP34Q70CQ2 3546 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 NPIPA5E9PKD4 350 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 K7ESF4 209 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 ZNF208O43345 1280 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 ZNF354AO60765 605 aaPredicted RBP23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 NDUFB6O95139 128 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 CD2P06729 351 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 SQSTM1Q13501 440 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 TOMM20Q15388 145 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 LINC00303Q3SY05 128 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 ASPHD2Q6ICH7 369 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 GLDNQ6ZMI3 551 aaPredicted RBP23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 MAMSTRQ6ZN01 415 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 ZNF574Q6ZN55 896 aaPredicted RBP23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 CKLFQ9UBR5 152 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 NPIPA1Q9UND3 350 aa23.66■■□□□ 1.38
CUEDC1-201ENST00000360238 LOC100289279A0A1B0GTE1 492 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 SRSF10O75494 262 aaKnown RBP23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 RBBP9O75884 186 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 NAGAP17050 411 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 ZBTB37Q5TC79 503 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 TMEM225Q6GV28 225 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 THOC7Q6I9Y2 204 aaKnown RBP23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 H1FNTQ75WM6 255 aaPredicted RBP23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 SLC38A9Q8NBW4 561 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 SLC26A10Q8NG04 563 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 NPDC1Q9NQX5 325 aaPredicted RBP23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 ATXN7L1Q9ULK2 861 aaPredicted RBP23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 ICMTO60725 284 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 WNT11O96014 354 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 ALDOBP05062 364 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 TPOP07202 933 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 CPN1P15169 458 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 DNASE1P24855 282 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 PCK2Q16822 640 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 ASB5Q8WWX0 329 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 FAM3DQ96BQ1 224 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 DDIT4LQ96D03 193 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 R4GMQ9 66 aa23.65■■□□□ 1.38
CUEDC1-201ENST00000360238 CACNA1EQ15878 2313 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 ETV2O00321 342 aaPredicted RBP23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 CSF1P09603 554 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 CXCL12P48061 93 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 EFNB2P52799 333 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 PER3P56645 1201 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 OR7A5Q15622 319 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 Q6ZTK2 550 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 PIGKQ92643 395 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 ARL5BQ96KC2 179 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 KCNK17Q96T54 332 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 NPAS1Q99742 590 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 CHST11Q9NPF2 352 aa23.64■■□□□ 1.38
CUEDC1-201ENST00000360238 CIB4A0PJX0 185 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 IL5P05113 134 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 ZNF823P16415 610 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 SLC25A25Q6KCM7 469 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 FAAP20Q6NZ36 180 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 PAPD4Q6PIY7 484 aaKnown RBP23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 THAP3Q8WTV1 239 aaPredicted RBP23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 TTC9Q92623 222 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 OR6C1Q96RD1 312 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 MESP1Q9BRJ9 268 aa23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 ELF5Q9UKW6 265 aaPredicted RBP23.64■■□□□ 1.37
CUEDC1-201ENST00000360238 KIF26BQ2KJY2 2108 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 TSC22D2O75157 780 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 IFNGR1P15260 489 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 IGFBP3P17936 291 aaPredicted RBP23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 PCGF3Q3KNV8 242 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 GLT8D1Q68CQ7 371 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 KDM8Q8N371 416 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 SPICQ8N5J4 248 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 RADILQ96JH8 1075 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 DUSP23Q9BVJ7 150 aa23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 GPN1Q9HCN4 374 aaPredicted RBP23.63■■□□□ 1.37
CUEDC1-201ENST00000360238 TRBV11-1A0A0K0K1C0 115 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 C2orf72A6NCS6 295 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 AQP8O94778 261 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 RAD52P43351 418 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 SELENOPP49908 381 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 C2orf76Q3KRA6 126 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 PTCRAQ6ISU1 281 aaPredicted RBP23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 MDGA2Q7Z553 956 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 OR8H1Q8NGG4 311 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 RELTQ969Z4 430 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 PPP1R14AQ96A00 147 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 MED11Q9P086 117 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 TMEM200CA6NKL6 621 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 RAD1O60671 282 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 SCRG1O75711 98 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 MPZL1O95297 269 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 TIAF1O95411 115 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 CD37P11049 281 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 EPHA8P29322 1005 aaPredicted RBP23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 DCDP81605 110 aaKnown RBP23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 TLE3Q04726 772 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 SSBP1Q04837 148 aaKnown RBP23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 FOXF1Q12946 379 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 ARSKQ6UWY0 536 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 NLRC3Q7RTR2 1065 aa23.62■■□□□ 1.37
CUEDC1-201ENST00000360238 OR5L2Q8NGL0 311 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms