RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CD80P33681 288 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 PRAMEF5Q5TYX0 476 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 PRAMEF6Q5VXH4 476 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 CD276Q5ZPR3 534 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 CLEC9AQ6UXN8 241 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 RBM45Q8IUH3 476 aaKnown RBP14.74□□□□□ -0.05
COL18A1-203ENST00000359759 DUSP23Q9BVJ7 150 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 SRRQ9GZT4 340 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 UFSP2Q9NUQ7 469 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 MUTYHQ9UIF7 546 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 ADRA1AP35348 466 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 CADM3Q8N126 398 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 RELL2Q8NC24 303 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-203ENST00000359759 LYSMD1Q96S90 227 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF2Q9BSG1 426 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-203ENST00000359759 PLA2G12AQ9BZM1 189 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 HRH3Q9Y5N1 445 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 HCRTR1O43613 425 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 CD38P28907 300 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 CCL11P51671 97 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 KRTDAPP60985 99 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 PIGMQ9H3S5 423 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 EVA1AQ9H8M9 152 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 WSB2Q9NYS7 404 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-203ENST00000359759 FLVCR2Q9UPI3 526 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 MN1Q10571 1320 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-203ENST00000359759 IL3RAP26951 378 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 CCR9P51686 369 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 ASTLQ6HA08 431 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-203ENST00000359759 MAVSQ7Z434 540 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 PRSS16Q9NQE7 514 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 HCSTQ9UBK5 93 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 PDGFBP01127 241 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-203ENST00000359759 SEMA3BQ13214 749 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 DCAF12Q5T6F0 453 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 PRR27Q6MZM9 219 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 C10orf90Q96M02 699 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 SEMG1P04279 462 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 TGFBR1P36897 503 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 PRTGQ2VWP7 1150 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 OR13D1Q8NGV5 346 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 TMED6Q8WW62 240 aa14.73□□□□□ -0.05
COL18A1-203ENST00000359759 FAM221AA4D161 298 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 CLDN10P78369 228 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 DGCR2P98153 550 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 TMEM88Q6PEY1 159 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 HTR3DQ70Z44 454 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 OR10G3Q8NGC4 313 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 BARHL1Q9BZE3 327 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 TMPRSS5Q9H3S3 457 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 PADI1Q9ULC6 663 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 IGHV3-20A0A0C4DH32 117 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 G3V3Q6 166 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 SLC2A10O95528 541 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 SOD1P00441 154 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 GTF2H5Q6ZYL4 71 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 MRPL10Q7Z7H8 261 aaKnown RBP14.72□□□□□ -0.05
COL18A1-203ENST00000359759 LCORQ96JN0 433 aaPredicted RBP14.72□□□□□ -0.05
COL18A1-203ENST00000359759 EMC6Q9BV81 110 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 SYT5O00445 386 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 HRO43593 1189 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 SPI1P17947 270 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 MPGP29372 298 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 PCBP3P57721 371 aaKnown RBP14.72□□□□□ -0.05
COL18A1-203ENST00000359759 C17orf67Q0P5P2 114 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF740Q8NDX6 193 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 PIGQQ9BRB3 760 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 KCNG2Q9UJ96 466 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 TRDV1A0A1B0GX56 115 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 hCG_1809904A0A1W2PP81 198 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 A0A1W2PPE2 198 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 A0A1W2PR64 198 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 A0A1W2PRV1 198 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 GFRA2O00451 464 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 ECI1P42126 302 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 AKR1C3P42330 323 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 CSN1S1P47710 185 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 ETFRF1Q6IPR1 90 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF534Q76KX8 674 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 OR6K3Q8NGY3 331 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 NRSN2Q9GZP1 204 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 NGBQ9NPG2 151 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 B3GAT1Q9P2W7 334 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 DLG5Q8TDM6 1919 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.72□□□□□ -0.05
COL18A1-203ENST00000359759 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.72□□□□□ -0.05
COL18A1-203ENST00000359759 TMEM200CA6NKL6 621 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 GUSBP08236 651 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 OR5G3P0C626 314 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 FCGR2CP31995 323 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 TEKQ02763 1124 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 OR13C8Q8NGS7 320 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 SLC35E1Q96K37 410 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 RIMS4Q9H426 269 aaPredicted RBP14.72□□□□□ -0.05
COL18A1-203ENST00000359759 ATP13A2Q9NQ11 1180 aa14.72□□□□□ -0.05
COL18A1-203ENST00000359759 A0A0B4J203 849 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 GLCEO94923 617 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 PIPP12273 146 aaPredicted RBP14.71□□□□□ -0.05
COL18A1-203ENST00000359759 CD1CP29017 333 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 SNRPNP63162 240 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms