RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MAP2K6P52564 334 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 OTUD1Q5VV17 481 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-201ENST00000358511 TRNP1Q6NT89 227 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 TMEM179BQ7Z7N9 219 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF100Q8IYN0 542 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SGPP1Q9BX95 441 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 SPHK2Q9NRA0 654 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 CYSLTR2Q9NS75 346 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 GPR34Q9UPC5 381 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 B3GALT5Q9Y2C3 310 aa8.08□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 XRCC3O43542 346 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 IL5P05113 134 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CSF2RAP15509 400 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SOX18P35713 384 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CRMP1Q14194 572 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ADIPOR1Q96A54 375 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SCMH1Q96GD3 660 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 NMNAT3Q96T66 252 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ZFYVE21Q9BQ24 234 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 C1orf198Q9H425 327 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 GREB1Q4ZG55 1949 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SSSCA1O60232 199 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SOD2P04179 222 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 GALP22466 123 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 MTCP1P56278 107 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 OR4F5Q8NH21 305 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 OR5K2Q8NHB8 316 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 NANOS1Q8WY41 292 aaKnown RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 HLA-CQ95604 372 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CMTM3Q96MX0 182 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 OR4F4Q96R69 305 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ABHD6Q9BV23 337 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 METTL9Q9H1A3 318 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 MOB1AQ9H8S9 216 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CBLCQ9ULV8 474 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 AHCTF1Q8WYP5 2266 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 HMSDA8MTL9 139 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 FCGR2CP31995 323 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 TMEM81Q6P7N7 255 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SLC38A6Q8IZM9 456 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ZFP62Q8NB50 900 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SUMF1Q8NBK3 374 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 PLK3Q9H4B4 646 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CDCP1Q9H5V8 836 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CXorf36Q9H7Y0 433 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 IL20Q9NYY1 176 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 PCDHGA1Q9Y5H4 931 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 FANCMQ8IYD8 2048 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 A8MVM7 634 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 FZD9O00144 591 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 GLCEO94923 617 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ADRA2CP18825 462 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ACOT6Q3I5F7 207 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 GABRG1Q8N1C3 465 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 EDAQ92838 391 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SMIM7Q9BQ49 75 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF331Q9NQX6 463 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 UBQLN4Q9NRR5 601 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 PLEK2Q9NYT0 353 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 M0QZQ0 153 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CBX7O95931 251 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 HOXB2P14652 356 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ELNP15502 786 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 VASPP50552 380 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 P2RX1P51575 399 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 OR7A5Q15622 319 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 NECAP1Q8NC96 275 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 DEFB126Q9BYW3 111 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 PRSS21Q9Y6M0 314 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 LDB3O75112 727 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 F13BP05160 661 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 GLAP06280 429 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 NAT2P11245 290 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 SLC11A1P49279 550 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 PCBD1P61457 104 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF718Q3SXZ3 478 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 HSD17B13Q7Z5P4 300 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 GNB4Q9HAV0 340 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CUTCQ9NTM9 273 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 PARP14Q460N5 1801 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 NPIPA5A0A0B4J1W7 369 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 DTYMKP23919 212 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ITGB8P26012 769 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 DVL1P1P54792 670 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 FAM57BQ71RH2 274 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CMTM4Q8IZR5 234 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 DOK4Q8TEW6 326 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 C11orf84Q9BUA3 381 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 RBPJLQ9UBG7 517 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ANKRD61A6NGH8 418 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 M0R143 59 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 TAPBPO15533 448 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CRXO43186 299 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 CHRM2P08172 466 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 QDPRP09417 244 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 EPXP11678 715 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 HIST1H3AP68431 136 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 POU3F1Q03052 451 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 KIR2DS3Q14952 304 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms