RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 STK11Q15831 433 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 SLC35D3Q5M8T2 416 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 MEDAGQ5VYS4 303 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 XKRXQ6PP77 449 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 ZNF627Q7L945 461 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 SHFQ7M4L6 423 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 BHLHA15Q7RTS1 189 aaPredicted RBP22.24■■□□□ 1.15
SSBP3-202ENST00000357475 SKA3Q8IX90 412 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 SLC22A24Q8N4F4 322 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 ZNF224Q9NZL3 707 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 MOKQ9UQ07 419 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 COMMD3-BMI1R4GMX3 469 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 TENM4Q6N022 2769 aa22.24■■□□□ 1.15
SSBP3-202ENST00000357475 CIB4A0PJX0 185 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 AGFG2O95081 481 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 PATE4P0C8F1 98 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 TUBA1BP68363 451 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 TUBA4AP68366 448 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 ZNF91Q05481 1191 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 SNTB1Q13884 538 aaKnown RBP22.23■■□□□ 1.15
SSBP3-202ENST00000357475 FBXL19-AS1Q494R0 122 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 C22orf34Q6ZV56 151 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 TUBA1AQ71U36 451 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 ELOVL5Q9NYP7 299 aa22.23■■□□□ 1.15
SSBP3-202ENST00000357475 SPTBN1Q01082 2364 aaKnown RBP22.23■■□□□ 1.15
SSBP3-202ENST00000357475 XPNPEP2O43895 674 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 CLDN14O95500 239 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 DBTP11182 482 aaKnown RBP22.22■■□□□ 1.15
SSBP3-202ENST00000357475 PSMB1P20618 241 aaKnown RBP22.22■■□□□ 1.15
SSBP3-202ENST00000357475 AGAP20933 346 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 MSR1P21757 451 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 UGT2B10P36537 528 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 NAA10P41227 235 aaPredicted RBP22.22■■□□□ 1.15
SSBP3-202ENST00000357475 ENDOGQ14249 297 aaKnown RBP22.22■■□□□ 1.15
SSBP3-202ENST00000357475 TBRG1Q3YBR2 411 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 ANKRD16Q6P6B7 361 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 ERI1Q8IV48 349 aaKnown RBP22.22■■□□□ 1.15
SSBP3-202ENST00000357475 TIGD4Q8IY51 512 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 ZNF416Q9BWM5 594 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 Q9H521 79 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 KCNJ16Q9NPI9 418 aa22.22■■□□□ 1.15
SSBP3-202ENST00000357475 WIPF3A6NGB9 483 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 SLC22A31A6NKX4 558 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 HCCSP53701 268 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 SH3BGRP55822 239 aaPredicted RBP22.21■■□□□ 1.15
SSBP3-202ENST00000357475 S100PBPQ96BU1 408 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 FBXO17Q96EF6 278 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 SIAEQ9HAT2 523 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 ADGRL4Q9HBW9 690 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 NOX3Q9HBY0 568 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 COL12A1Q99715 3063 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 TGFBR3Q03167 851 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 KCNMB1Q16558 191 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 C6orf141Q5SZD1 244 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 CORO6Q6QEF8 472 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 LINC00346Q8IVM7 164 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 WDR31Q8NA23 367 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 OR4F15Q8NGB8 312 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 OR51G2Q8NGK0 314 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 RFKQ969G6 155 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 RNFT2Q96EX2 444 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 Q96MT0 163 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 ACTR6Q9GZN1 396 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 MARCH7Q9H992 704 aa22.21■■□□□ 1.15
SSBP3-202ENST00000357475 WARS2Q9UGM6 360 aaKnown RBP22.21■■□□□ 1.15
SSBP3-202ENST00000357475 HLA-HP01893 362 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 OR8G3PP0DMU2 310 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 NPR2P20594 1047 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 IL32P24001 234 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 MTNR1AP48039 350 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 ADAM8P78325 824 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 GGTLC2Q14390 218 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 FAM27BQ5VT28 67 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 KRT80Q6KB66 452 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 C1orf162Q8NEQ5 155 aaPredicted RBP22.2■■□□□ 1.14
SSBP3-202ENST00000357475 BPIFB6Q8NFQ5 453 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 RNASE6Q93091 150 aaKnown RBP22.2■■□□□ 1.14
SSBP3-202ENST00000357475 NPDC1Q9NQX5 325 aaPredicted RBP22.2■■□□□ 1.14
SSBP3-202ENST00000357475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.2■■□□□ 1.142e-7■■■□□ 14.6
SSBP3-202ENST00000357475 LHFPL6Q9Y693 200 aa22.2■■□□□ 1.14
SSBP3-202ENST00000357475 C16orf97H3BN30 126 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 ADRA2AP08913 450 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 MED21Q13503 144 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 LCN1P1Q5VSP4 162 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 RFLNBQ8N5W9 214 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 OR6N2Q8NGY6 317 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 OR52N5Q8NH56 324 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 SGCDQ92629 289 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 LGALS12Q96DT0 336 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 INTS14Q96SY0 518 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 SLC17A5Q9NRA2 495 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 HAO2Q9NYQ3 351 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 KLHDC2Q9Y2U9 406 aa22.19■■□□□ 1.14
SSBP3-202ENST00000357475 DOPEY1Q5JWR5 2465 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 CLEC18AA5D8T8 446 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 ZNF593O00488 134 aaPredicted RBP22.18■■□□□ 1.14
SSBP3-202ENST00000357475 WNT11O96014 354 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 HRGP04196 525 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 SPARCP09486 303 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 GUCA1AP43080 201 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms