RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FAM27BQ5VT28 67 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 RGS7BPQ6MZT1 257 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 RFPL4BQ6ZWI9 263 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 DHRS1Q96LJ7 313 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 SNX18Q96RF0 628 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 ALG12Q9BV10 488 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 OR2H1Q9GZK4 316 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 POFUT1Q9H488 388 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 ADA2Q9NZK5 511 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 TAAR3PQ9P1P4 343 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 CD300AQ9UGN4 299 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 SIGLEC7Q9Y286 467 aa14.3□□□□□ -0.12
PDLIM7-201ENST00000355572 ARHGAP32A7KAX9 2087 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 LOC100289279A0A1B0GTE1 492 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 A0A1W2PPL8 197 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 GMNCA6NCL1 334 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 RP2O75695 350 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 GPANK1O95872 356 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 NGFP01138 241 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 LCKP06239 509 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 H1F0P07305 194 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 CTLA4P16410 223 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 UCP2P55851 309 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 GNGT1P63211 74 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 CCNIQ14094 377 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 TBC1D28Q2M2D7 210 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 CHRFAM7AQ494W8 412 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 ZBED5Q49AG3 693 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 ZNF774Q6NX45 483 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 PTCHD4Q6ZW05 846 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 PIGWQ7Z7B1 504 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 RNF113BQ8IZP6 322 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 ICA1LQ8NDH6 482 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 CMTM5Q96DZ9 223 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 ZNF416Q9BWM5 594 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 NARFLQ9H6Q4 476 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 SPAG4Q9NPE6 437 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 FBXL3Q9UKT7 428 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 SPEF1Q9Y4P9 236 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 CACNG2Q9Y698 323 aa14.29□□□□□ -0.12
PDLIM7-201ENST00000355572 SLC22A23A1A5C7 686 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 VSTM5A8MXK1 200 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 MPZL1O95297 269 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 CD14P08571 375 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 CCNOP22674 350 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 STOMP27105 288 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 GZMKP49863 264 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 HSF2Q03933 536 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 TAF11Q15544 211 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 FGD3Q5JSP0 725 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 THEM4Q5T1C6 240 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 HDDC2Q7Z4H3 204 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 OR1J1Q8NGS3 322 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 OR52J3Q8NH60 311 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 CCNB1IP1Q9NPC3 277 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 POLE4Q9NR33 117 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 ZNF275Q9NSD4 429 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 TMEM160Q9NX00 188 aa14.28□□□□□ -0.12
PDLIM7-201ENST00000355572 TEX13CA0A0J9YWL9 993 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 IQCMA0A1B0GVH7 501 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 A0A1W2PPW3 197 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 A0A1W2PRQ8 180 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 C5orf49A4QMS7 147 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 DCTN6O00399 190 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 CST2P09228 141 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 RHCEP18577 417 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 APLNRP35414 380 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 RPS23P62266 143 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 CBX1P83916 185 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 DGCR6Q14129 220 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 CXXC5Q7LFL8 322 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 CPLX4Q7Z7G2 160 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 DPPA2Q7Z7J5 298 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 CLDND2Q8NHS1 167 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 SYNPRQ8TBG9 265 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 SLC25A40Q8TBP6 338 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 IPCEF1Q8WWN9 437 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 MARS2Q96GW9 593 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 RSRC1Q96IZ7 334 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 TSSK2Q96PF2 358 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 RACGAP1Q9H0H5 632 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 GORASP2Q9H8Y8 452 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 STX18Q9P2W9 335 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 RPS6KA6Q9UK32 745 aa14.27□□□□□ -0.13
PDLIM7-201ENST00000355572 DYSFO75923 2080 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 HTR3EA5X5Y0 456 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 C17orf100A8MU93 164 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 FAM157AC9JC47 383 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 ARPC2O15144 300 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 CDC14BO60729 498 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 TGFAP01135 160 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 FAM157CP0CG43 387 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 HSD17B1P14061 328 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 IFNA8P32881 189 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 RPL4P36578 427 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 CDKN2AP42771 156 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 KLF3P57682 345 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 CCL8P80075 99 aa14.26□□□□□ -0.13
PDLIM7-201ENST00000355572 PLP2Q04941 152 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms