RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FER1L4A9Z1Z3 1794 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 G3V3Q6 166 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 CBX7O95931 251 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 UBE2MP61081 183 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 HNRNPA1L2Q32P51 320 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 GPR119Q8TDV5 335 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 PLEKHF2Q9H8W4 249 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 ALOX5APP20292 161 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 RBM45Q8IUH3 476 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 CYSLTR2Q9NS75 346 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 V9GYS6 101 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 JMJD7P0C870 316 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 SNRPEP62304 92 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 RUNX3Q13761 415 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 OTUD1Q5VV17 481 aaPredicted RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 FCRL6Q6DN72 434 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 RASD2Q96D21 266 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZDHHC5Q9C0B5 715 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 MBLAC1A4D2B0 266 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLCO2B1O94956 709 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 EMP3P54852 163 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 C11orf87Q6NUJ2 197 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 PAQR9Q6ZVX9 377 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 NKAIN4Q8IVV8 208 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 LMNTD1Q8N9Z9 388 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4C5Q8NGB2 326 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 NXT1Q9UKK6 140 aaKnown RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 MYO18AQ92614 2054 aaKnown RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 SIGLEC6O43699 453 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 HTR5AP47898 357 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 EPHA4P54764 986 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 EEF1A1P68104 462 aaKnown RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF85Q03923 595 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 TUSC2O75896 110 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 AFMIDQ63HM1 303 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 STT3BQ8TCJ2 826 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 GMLQ99445 158 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 STACQ99469 402 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 AUNIPQ9H7T9 357 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 SPATA6Q9NWH7 488 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 MT-ATP6P00846 226 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 APEHP13798 732 aaKnown RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 ELLP55199 621 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 TPPP2P59282 170 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 GRB2P62993 217 aaKnown RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 GABREP78334 506 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 CDK5R1Q15078 307 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 ANKRD16Q6P6B7 361 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF574Q6ZN55 896 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM123Q8N131 208 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 DEFB119Q8N690 84 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 PFN4Q8NHR9 129 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 EDAQ92838 391 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 CCNL2Q96S94 520 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 P2RY12Q9H244 342 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 EPHX3Q9H6B9 360 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 H0Y8G0 127 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 CD3DP04234 171 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF542PQ5EBM4 170 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 UBAC2Q8NBM4 344 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 TM7SF3Q9NS93 570 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 MED16Q9Y2X0 877 aa11.67□□□□□ -0.54
SYNCRIP-201ENST00000355238 P2RY2P41231 377 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 SRYQ05066 204 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 NCR3LG1Q68D85 454 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 CATSPERDQ86XM0 798 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 AKR1E2Q96JD6 320 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 SFXN1Q9H9B4 322 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 STARD5Q9NSY2 213 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 MCTS1Q9ULC4 181 aaKnown RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 CICQ96RK0 1608 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 M0R082 166 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 KLK8O60259 260 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 ACVR1Q04771 509 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 FAAP20Q6NZ36 180 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR10D4PQ8NGN7 298 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR6S1Q8NH40 331 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 TAS2R4Q9NYW5 299 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 RPH3ALQ9UNE2 315 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 SRPK3Q9UPE1 567 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 P2RX1P51575 399 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 NECAP1Q8NC96 275 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR51A2Q8NGJ7 313 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 SMIM7Q9BQ49 75 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 PIGQQ9BRB3 760 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 NUDT22Q9BRQ3 303 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 CLDND1Q9NY35 253 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms