RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LOC100289279A0A1B0GTE1 492 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 GGT3PA6NGU5 568 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 VSTM2BA6NLU5 285 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 CTAG2O75638 210 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 SCRG1O75711 98 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 AQP8O94778 261 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 ONECUT2O95948 504 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 HPXP02790 462 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 HLA-DOBP13765 273 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 CAMK2DQ13557 499 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 OR7A5Q15622 319 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 PCK2Q16822 640 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 OR7E24Q6IFN5 339 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 DEGS2Q6QHC5 323 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 NDUFAF7Q7L592 441 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 RNF138Q8WVD3 245 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 ASB5Q8WWX0 329 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 FAM3DQ96BQ1 224 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 FLVCR2Q9UPI3 526 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 R4GMQ9 66 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 CPAMD8Q8IZJ3 1885 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 ETV2O00321 342 aaPredicted RBP19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 TMIGD3P0DMS9 266 aaPredicted RBP19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 POU3F4P49335 361 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 VEGFCP49767 419 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 MECP2P51608 486 aaKnown RBP19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 C2orf76Q3KRA6 126 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 LYSMD4Q5XG99 296 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 SLC26A10Q8NG04 563 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 THAP3Q8WTV1 239 aaPredicted RBP19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 RADILQ96JH8 1075 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 GUCD1Q96NT3 240 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 ZNF436Q9C0F3 470 aaPredicted RBP19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 CHST11Q9NPF2 352 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 DLL4Q9NR61 685 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 SDHAF3Q9NRP4 125 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 MED11Q9P086 117 aa19.97■□□□□ 0.79
NKX2-1-201ENST00000354822 TRBV11-1A0A0K0K1C0 115 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 CPED1A4D0V7 1026 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 MEGF11A6BM72 1044 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 H3BSH0 61 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 ICMTO60725 284 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 ZNF354AO60765 605 aaPredicted RBP19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 IL5P05113 134 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 ITGA5P08648 1049 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 CSF1P09603 554 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 IFNGR1P15260 489 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 EPHA8P29322 1005 aaPredicted RBP19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 DCTDP32321 178 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 FOXL2P58012 376 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 TLE3Q04726 772 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 OTPQ5XKR4 325 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 TMEM225Q6GV28 225 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 FAM166AQ6J272 317 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 GLDNQ6ZMI3 551 aaPredicted RBP19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 KDM8Q8N371 416 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 ARL5BQ96KC2 179 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 KCNK17Q96T54 332 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 BEX1Q9HBH7 125 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 GPN1Q9HCN4 374 aaPredicted RBP19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 FANCFQ9NPI8 374 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 B3GALT5Q9Y2C3 310 aa19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 ARID1BQ8NFD5 2236 aaPredicted RBP19.96■□□□□ 0.79
NKX2-1-201ENST00000354822 C2orf72A6NCS6 295 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 ARPC1BO15143 372 aaKnown RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 NDUFB6O95139 128 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 ISG15P05161 165 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 CPN1P15169 458 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 FSTP19883 344 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 DHPSP49366 369 aaPredicted RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 SSBP1Q04837 148 aaKnown RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 TSSK4Q6SA08 328 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 MAMSTRQ6ZN01 415 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 MS4A3Q96HJ5 214 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 NPDC1Q9NQX5 325 aaPredicted RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 HHLA2Q9UM44 414 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 ZFAND5O76080 213 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 HRGP04196 525 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 CD37P11049 281 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 PTHLHP12272 177 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 IL11P20809 199 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 DNASE1P24855 282 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 HSF1Q00613 529 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 MFGE8Q08431 387 aaPredicted RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 SEZ6L2Q6UXD5 910 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 ZNF704Q6ZNC4 412 aaPredicted RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 CPEB2Q7Z5Q1 589 aaKnown RBP19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 MRGPRX4Q96LA9 322 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 CABIN1Q9Y6J0 2220 aa19.95■□□□□ 0.78
NKX2-1-201ENST00000354822 CCDC163A0A0D9SF12 145 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 C19orf67A6NJJ6 358 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 TMEM200CA6NKL6 621 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 SRSF10O75494 262 aaKnown RBP19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 HOXA6P31267 233 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 RIPPLY1Q0D2K3 151 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 LINC00303Q3SY05 128 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 SLC25A53Q5H9E4 307 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 GUSBP11Q6P575 273 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 SPICQ8N5J4 248 aa19.94■□□□□ 0.78
NKX2-1-201ENST00000354822 OR11H4Q8NGC9 324 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms