RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 LYARQ9NX58 379 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NDE1Q9NXR1 346 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 B4GALT7Q9UBV7 327 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MUTYHQ9UIF7 546 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TRAF3IP3Q9Y228 551 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CDC42BPBQ9Y5S2 1711 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CDHR2Q9BYE9 1310 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 HCFC1P51610 2035 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 EIF4E2O60573 245 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 HCN1O60741 890 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RAMP1O60894 148 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 HUS1O60921 280 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SC5DO75845 299 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC172P0C7W6 258 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CALCRP30988 508 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LONP1P36776 959 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GPM6AP51674 278 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GPX6P59796 221 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RPL36AP83881 106 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MESDQ14696 234 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NDUFAF6Q330K2 333 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 HSDL1Q3SXM5 330 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 FHL5Q5TD97 284 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GPRIN3Q6ZVF9 776 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MRPL21Q7Z2W9 205 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 KIF2BQ8N4N8 673 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MREGQ8N565 214 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 AGAP11Q8TF27 550 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TUBGCP2Q9BSJ2 902 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CENPHQ9H3R5 247 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 STMN3Q9NZ72 180 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NUP50Q9UKX7 468 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RCL1Q9Y2P8 373 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RPL36Q9Y3U8 105 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SPATA31E1Q6ZUB1 1445 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 FLNBO75369 2602 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CFAP65Q6ZU64 1925 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 LMO7Q8WWI1 1683 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 TRBV9A0A0B4J1U6 114 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1B0GW15 77 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 A8MX80 341 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CABYRO75952 493 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV2-5P01817 119 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC166P0CW27 439 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SNHG28P0DPA3 235 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RNH1P13489 461 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF250P15622 560 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 GATA1P15976 413 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CD9P21926 228 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SLC2A5P22732 501 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 YWHABP31946 246 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 NAA10P41227 235 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 EMDP50402 254 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RORCP51449 518 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RND2P52198 227 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 YWHAGP61981 247 aaKnown RBP eCLIP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 MRPS22P82650 360 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SARNPP82979 210 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SLC25A11Q02978 314 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CDH17Q12864 832 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 MICAQ29983 383 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 RFLNAQ6ZTI6 216 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 FAM220AQ7Z4H9 259 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF546Q86UE3 836 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 LHFPL3Q86UP9 236 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 MARCH9Q86YJ5 346 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 Q8N377 158 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 EID2Q8N6I1 236 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR2A12Q8NGT7 310 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 DDI1Q8WTU0 396 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 VOPP1Q96AW1 172 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 HSFY1Q96LI6 401 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 JPT2Q9H910 190 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 EXOSC3Q9NQT5 275 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR1A1Q9P1Q5 309 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ST3GAL6Q9Y274 331 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 YARS2Q9Y2Z4 477 aaKnown RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC37A2A6NM11 1700 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 UQCRHLA0A096LP55 91 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 GOLGA8QA0A0J9YX86 632 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF816-ZNF321PA0A0X1KG74 233 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 KBTBD11-OT1A0A1B0GTJ5 212 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 PSMB11A5LHX3 300 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 E7ENQ6 273 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CCL21O00585 134 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 SLC19A2O60779 497 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 TNFSF13O75888 250 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 TBX6O95947 436 aaPredicted RBP1.26□□□□□ -2.21
BRCA1-202ENST00000354071 UQCRHP07919 91 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 HMOX2P30519 316 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 HTR2BP41595 481 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 OR3A4PP47883 348 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 MNAT1P51948 309 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZSCAN26Q16670 478 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 C14orf177Q52M58 125 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF506Q5JVG8 444 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 ADNP2Q6IQ32 1131 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 DNAJC24Q6P3W2 148 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 LINC00173Q6ZV60 143 aa1.26□□□□□ -2.21
BRCA1-202ENST00000354071 CBLN2Q8IUK8 224 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms