RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SMG1Q96Q15 3661 aaKnown RBP23.8■■□□□ 1.4
SSBP4-202ENST00000348495 MRPS14O60783 128 aaKnown RBP23.8■■□□□ 1.4
SSBP4-202ENST00000348495 PSKH1P11801 424 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 TEX30Q5JUR7 227 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 ATCAYQ86WG3 371 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 STX19Q8N4C7 294 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 RND1Q92730 232 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 FOXB1Q99853 325 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 NELFAQ9H3P2 528 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 PCDHGB1Q9Y5G3 927 aa23.8■■□□□ 1.4
SSBP4-202ENST00000348495 RAB36O95755 333 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 MPGP29372 298 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ENTPD1P49961 510 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 NRN1LQ496H8 165 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ZNF773Q6PK81 442 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ZNF610Q8N9Z0 462 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 TSPAN14Q8NG11 270 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 HTRA1Q92743 480 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ZNF649Q9BS31 505 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 YIPF3Q9GZM5 350 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ZNF593O00488 134 aaPredicted RBP23.79■■□□□ 1.4
SSBP4-202ENST00000348495 CCL21O00585 134 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ITGA5P08648 1049 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 NPR2P20594 1047 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ADAM8P78325 824 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 ARF1P84077 181 aaKnown RBP23.79■■□□□ 1.4
SSBP4-202ENST00000348495 IGFBP7Q16270 282 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 CDC20BQ86Y33 519 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 SLC35F2Q8IXU6 374 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 GABRG1Q8N1C3 465 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 CDCA4Q9BXL8 241 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 OPN3Q9H1Y3 402 aaPredicted RBP23.79■■□□□ 1.4
SSBP4-202ENST00000348495 EMC7Q9NPA0 242 aa23.79■■□□□ 1.4
SSBP4-202ENST00000348495 MT-ND2P03891 347 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 OR2T7P0C7T2 308 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 MSR1P21757 451 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 HCCSP53701 268 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 LSM6P62312 80 aaKnown RBP23.78■■□□□ 1.4
SSBP4-202ENST00000348495 FAM27BQ5VT28 67 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 RNLSQ5VYX0 342 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 ACBD7Q8N6N7 88 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 OR6N2Q8NGY6 317 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 OR2T27Q8NH04 317 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 SIAEQ9HAT2 523 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 KCNG2Q9UJ96 466 aa23.78■■□□□ 1.4
SSBP4-202ENST00000348495 TRIM64CA6NLI5 447 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 C12orf71A8MTZ7 269 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 SMIM18P0DKX4 95 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 ZNF823P16415 610 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 IGHV1-2P23083 117 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 GUCA1AP43080 201 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-202ENST00000348495 ACTC1P68032 377 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 ACTA1P68133 377 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 IRF3Q14653 427 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 DPY19L4Q7Z388 723 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-202ENST00000348495 OR10H4Q8NGA5 316 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 PIGMQ9H3S5 423 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 CYB5R1Q9UHQ9 305 aa23.77■■□□□ 1.4
SSBP4-202ENST00000348495 SEC14L2O76054 403 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 B4GALT1P15291 398 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 COX5AP20674 150 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 RPS27P42677 84 aaKnown RBP23.76■■□□□ 1.39
SSBP4-202ENST00000348495 SH3BGRP55822 239 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-202ENST00000348495 ENDOGQ14249 297 aaKnown RBP23.76■■□□□ 1.39
SSBP4-202ENST00000348495 SGCAQ16586 387 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 C9orf135Q5VTT2 229 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 LIX1LQ8IVB5 337 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 SPARTQ8N0X7 666 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 OTOSQ8NHW6 89 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 MNTQ99583 582 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 INPP5EQ9NRR6 644 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 TAS2R16Q9NYV7 291 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 COPS3Q9UNS2 423 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 KLHDC2Q9Y2U9 406 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 A0A1W2PQL4 384 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-202ENST00000348495 MSTNO14793 375 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 LIMS3P0CW19 117 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 LIMS4P0CW20 117 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 ALOX5APP20292 161 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 BMP5P22003 454 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 GNLYP22749 145 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 UQCRFS1P47985 274 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 ETV1P50549 477 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 SLC22A24Q8N4F4 322 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 RFLNBQ8N5W9 214 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 OR10H5Q8NGA6 315 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF416Q9BWM5 594 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 CCDC90BQ9GZT6 254 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 EXOSC1Q9Y3B2 195 aaKnown RBP23.76■■□□□ 1.39
SSBP4-202ENST00000348495 LHFPL6Q9Y693 200 aa23.76■■□□□ 1.39
SSBP4-202ENST00000348495 A0A087WXM4 84 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 SPARCP09486 303 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF85Q03923 595 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF474Q6S9Z5 364 aaPredicted RBP23.75■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF813Q6ZN06 617 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 BEND4Q6ZU67 534 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 TBX5Q99593 518 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 ERVK13-1Q9NX77 482 aa23.75■■□□□ 1.39
SSBP4-202ENST00000348495 CLEC2DQ9UHP7 191 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms