RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 OR52A1Q9UKL2 312 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 FOXJ3Q9UPW0 622 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 RHBDD3Q9Y3P4 386 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
NUP50-201ENST00000347635 DVL2O14641 736 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 ACSM4P0C7M7 580 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 CAMK2DQ13557 499 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PPA1Q15181 289 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 ELFN2Q5R3F8 820 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 KIRREL2Q6UWL6 708 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PRSS42Q7Z5A4 293 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 OR4C16Q8NGL9 310 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PELI1Q96FA3 418 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 OR5B2Q96R09 309 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 GPA33Q99795 319 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 EHFQ9NZC4 300 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TOR1AO14656 332 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 NTN1O95631 604 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 TAS2R46P59540 309 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 RPP25Q9BUL9 199 aaKnown RBP13.42□□□□□ -0.26
NUP50-201ENST00000347635 DSPPQ9NZW4 1301 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 STK17BO94768 372 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 MT-ATP6P00846 226 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 CD3DP04234 171 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 HOXB5P09067 269 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 SDHBP21912 280 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 SELENOVP59797 346 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 LSM11P83369 360 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUP50-201ENST00000347635 C19orf57Q0VDD7 668 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 ZIC1Q15915 447 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 RAB3CQ96E17 227 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 DNTTIP1Q9H147 329 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 XRCC3O43542 346 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 RPL27P61353 136 aaKnown RBP13.42□□□□□ -0.26
NUP50-201ENST00000347635 EXT1Q16394 746 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 UBE3DQ7Z6J8 389 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 LINC00346Q8IVM7 164 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 IFI44Q8TCB0 444 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 ASB13Q8WXK3 278 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 YIPF5Q969M3 257 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 NRTNQ99748 197 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 SULT4A1Q9BR01 284 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 LGALS8O00214 317 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
NUP50-201ENST00000347635 RCBTB1Q8NDN9 531 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 OR56B1Q8NGI3 324 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 ZNF442Q9H7R0 627 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 UNKLQ9H9P5 680 aaKnown RBP13.42□□□□□ -0.26
NUP50-201ENST00000347635 PARPBPQ9NWS1 579 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 BOKQ9UMX3 212 aaPredicted RBP13.42□□□□□ -0.26
NUP50-201ENST00000347635 HRH3Q9Y5N1 445 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 B3GALT1Q9Y5Z6 326 aa13.42□□□□□ -0.26
NUP50-201ENST00000347635 LCTP09848 1927 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 HSPB2A8KAH6 182 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 H0YIG0 161 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 PYCARD-AS1I3L0S3 204 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 HSPB2Q16082 182 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 C2orf76Q3KRA6 126 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ZNF362Q5T0B9 420 aaPredicted RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 Q6ZS52 159 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ZNF100Q8IYN0 542 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 DND1Q8IYX4 353 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 IP6K3Q96PC2 410 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 SMIM3Q9BZL3 60 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 SELENOIQ9C0D9 397 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 PPP1R3EQ9H7J1 279 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ACKR4Q9NPB9 350 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ZNF346Q9UL40 294 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 UBE2J1Q9Y385 318 aaPredicted RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 NDUFB6O95139 128 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 WDPCPO95876 746 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 PMP2P02689 132 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 NME1P15531 152 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 FXYD4P59646 89 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 RPL18Q07020 188 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 RTL6Q6ICC9 239 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 MARCH3Q86UD3 253 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 TEX19Q8NA77 164 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 FGGYQ96C11 551 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 COX14Q96I36 57 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 CCDC86Q9H6F5 360 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 TRPM7Q96QT4 1865 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 SCN10AQ9Y5Y9 1956 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 F5H5K5 113 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 NSA2O95478 260 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 OR4E1P0C645 316 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ARG2P78540 354 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 LCN10Q6JVE6 187 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 ADGRG3Q86Y34 549 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 GPR137CQ8N3F9 429 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 OR11H7Q8NGC8 314 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 RNF170Q96K19 258 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 C1orf198Q9H425 327 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 MRPS28Q9Y2Q9 187 aaKnown RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 DIRAS3O95661 229 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 IGHG1P01857 330 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms