RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMEM205Q6UW68 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF836Q6ZNA1 936 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 MBOAT2Q6ZWT7 520 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 DPY19L4Q7Z388 723 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SYT4Q9H2B2 425 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 NDUFB11Q9NX14 153 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 TIMM10BQ9Y5J6 103 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 NUDT19A8MXV4 375 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SP9P0CG40 484 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 PPICP45877 212 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 NPSR1Q6W5P4 371 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 FAM185AQ8N0U4 392 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 OR13C5Q8NGS8 318 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 OR2V1Q8NHB1 315 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SGPP1Q9BX95 441 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 UBQLN3Q9H347 655 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SLC52A3Q9NQ40 469 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CCL21O00585 134 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 PRKNO60260 465 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 SPDEFO95238 335 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 TK1P04183 234 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 HOXC4P09017 264 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CSF3P09919 207 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A6P0DMU7 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A5P0DMU8 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A7P0DMV0 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A8P0DMV1 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A9P0DMV2 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ELK1P19419 428 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 BMP5P22003 454 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 PRPH2P23942 346 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 BSGP35613 385 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 MRPL19P49406 292 aaKnown RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 GFERP55789 205 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A2Q5DJT8 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A1Q5HYN5 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CCSAPQ6IQ19 270 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ESPNLQ6ZVH7 1005 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF767PQ75MW2 155 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 CT45A3Q8NHU0 189 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 OR14A2Q96R54 314 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 GABRG3Q99928 467 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 TEX101Q9BY14 249 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 ERVMER34-1Q9H9K5 563 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 NUBP2Q9Y5Y2 271 aa9.93□□□□□ -0.82
CLCN6-202ENST00000346436 DOCK3Q8IZD9 2030 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 PRR33A8MZF0 331 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 KDM4EB2RXH2 506 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 HOXD4P09016 255 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 SUMO3P55854 103 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 GRK1Q15835 563 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 RSPO4Q2I0M5 234 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 TAAR8Q969N4 342 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 CMTM3Q96MX0 182 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 NKX3-1Q99801 234 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 CHRNA9Q9UGM1 479 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 SLC17A4Q9Y2C5 497 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 CHST2Q9Y4C5 530 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 GOLGB1Q14789 3259 aaKnown RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 GABARAPH6UMI1 98 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 CSRP3P50461 194 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 OR10A3P58181 314 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 RRAS2P62070 204 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 RAC1P63000 192 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 FOXK2Q01167 660 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 IFITM3Q01628 133 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF628Q5EBL2 1059 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 C1orf140Q5VVS0 124 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM215Q68D42 235 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM150AQ86TG1 271 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 MARCH3Q86UD3 253 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 RDH10Q8IZV5 341 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 GLYATL2Q8WU03 294 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 NMNAT3Q96T66 252 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 METTL17Q9H7H0 456 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF286AQ9HBT8 521 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 HINT3Q9NQE9 182 aaKnown RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 OR8G3PP0DMU2 310 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 RPL11P62913 178 aaKnown RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 FAM27D1Q5T7N8 215 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 APOOLQ6UXV4 268 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 OR1S1Q8NH92 325 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 LGALS14Q8TCE9 139 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 MRGPRX4Q96LA9 322 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 ISG20L2Q9H9L3 353 aaKnown RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 TREM1Q9NP99 234 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 GLRX2Q9NS18 164 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 AKR7A2O43488 359 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 NTN1O95631 604 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 MAP2K6P52564 334 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 DSCR4P56555 118 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 DUSP5Q16690 384 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 HFEQ30201 348 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 CAMKMTQ7Z624 323 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 SIAH3Q8IW03 269 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF707Q96C28 371 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 MS4A6EQ96DS6 147 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 SPACA9Q96E40 222 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-202ENST00000346436 GNB4Q9HAV0 340 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms