RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LIPT2A6NK58 231 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 RGS5O15539 181 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF292O60281 2723 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 IGHMP01871 453 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CD63P08962 238 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 SHC1P29353 583 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 TNFSF8P32971 234 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ID4P47928 161 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 TAS2R43P59537 309 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 PUDPQ08623 228 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 MYBPHQ13203 477 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 SSPNQ14714 243 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ETFDHQ16134 617 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 H1FNTQ75WM6 255 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CCDC190Q86UF4 302 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 LAX1Q8IWV1 398 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 SYS1Q8N2H4 156 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 OR6S1Q8NH40 331 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 GHSRQ92847 366 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 NXPE2Q96DL1 559 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 GNRHR2Q96P88 292 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CHST11Q9NPF2 352 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 HPF1Q9NWY4 346 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ING1Q9UK53 422 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 B9D1Q9UPM9 204 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 RPH3AQ9Y2J0 694 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 MRPS18BQ9Y676 258 aaKnown RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 IQCMA0A1B0GVH7 501 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 FAM25AB3EWG3 89 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 FAM25CB3EWG5 89 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 FAM25GB3EWG6 89 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 OGG1O15527 345 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 WIPF1O43516 503 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CTLA4P16410 223 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 GTF2E2P29084 291 aaKnown RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 DLSTP36957 453 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 GBX2P52951 348 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 RPS15P62841 145 aaKnown RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 SIRPAP78324 504 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 TLE3Q04726 772 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CDC20Q12834 499 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 SNTA1Q13424 505 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CDK5R1Q15078 307 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF684Q5T5D7 378 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 DPY19L4Q7Z388 723 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 MDGA2Q7Z553 956 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CEACAM19Q7Z692 300 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 CDC20BQ86Y33 519 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 PLCZ1Q86YW0 608 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 FAM83FQ8NEG4 500 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 PAQR8Q8TEZ7 354 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ASB10Q8WXI3 467 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ADAD1Q96M93 576 aaKnown RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 JSRP1Q96MG2 331 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ANGPTL4Q9BY76 406 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 POTEKPQ9BYX7 375 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 MIXL1Q9H2W2 232 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 SLA2Q9H6Q3 261 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ABCB9Q9NP78 766 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ABCB10Q9NRK6 738 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 P4HTMQ9NXG6 502 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 VSX1Q9NZR4 365 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-202ENST00000345734 ZFHX4Q86UP3 3567 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 A0A087WV48 116 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SLC22A23A1A5C7 686 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SLC16A7O60669 478 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 HPP00738 406 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 OR8G3PP0DMU2 310 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 GAAP10253 952 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 CD53P19397 219 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 GALP22466 123 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 EDNRAP25101 427 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SFTPDP35247 375 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 ETV6P41212 452 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 GDI2P50395 445 aaKnown RBP8.25□□□□□ -1.09
ATG4A-202ENST00000345734 POLR2GP62487 172 aaKnown RBP eCLIP8.25□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF45Q02386 682 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 ZP4Q12836 540 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 DNASE1L3Q13609 305 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 MFSD13AQ14CX5 517 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 TRIP6Q15654 476 aaKnown RBP8.25□□□□□ -1.09
ATG4A-202ENST00000345734 IGSF11Q5DX21 431 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SPANXN2Q5MJ10 180 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SLC22A10Q63ZE4 541 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 CD163Q86VB7 1156 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 NR2C2APQ86WQ0 139 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF248Q8NDW4 579 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 OR6N2Q8NGY6 317 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SMIM19Q96E16 107 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 C5orf34Q96MH7 638 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 OR5B2Q96R09 309 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 PDCD1LG2Q9BQ51 273 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SLC30A2Q9BRI3 323 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 RNF32Q9H0A6 362 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 PTGES2Q9H7Z7 377 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 POLE4Q9NR33 117 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SERINC1Q9NRX5 453 aa8.25□□□□□ -1.09
ATG4A-202ENST00000345734 SACM1LQ9NTJ5 587 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms