RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 AGAP4Q96P64 663 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 ATF6BQ99941 703 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 BOKQ9UMX3 212 aaPredicted RBP12.06□□□□□ -0.48
CDC42-202ENST00000344548 SLC22A13Q9Y226 551 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 OR4C45A6NMZ5 311 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 WISP2O76076 250 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 IGHG1P01857 330 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 QDPRP09417 244 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 SPINK2P20155 84 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 ANOS1P23352 680 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 EIF1AXP47813 144 aaKnown RBP12.05□□□□□ -0.48
CDC42-202ENST00000344548 CARD18P57730 90 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 RAC3P60763 192 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
CDC42-202ENST00000344548 SLC25A35Q3KQZ1 300 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 WDR38Q5JTN6 314 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 FAM205BPQ63HN1 556 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 HBMQ6B0K9 141 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 MS4A15Q8N5U1 240 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 OR9K2Q8NGE7 335 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 OR10S1Q8NGN2 331 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 RBP7Q96R05 134 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 WDR12Q9GZL7 423 aaKnown RBP12.05□□□□□ -0.48
CDC42-202ENST00000344548 ABI3Q9P2A4 366 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 COMMD3Q9UBI1 195 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 RASD1Q9Y272 281 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 LRP12Q9Y561 859 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 PEX16Q9Y5Y5 336 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 TMEM14AQ9Y6G1 99 aa12.05□□□□□ -0.48
CDC42-202ENST00000344548 NCOA6Q14686 2063 aaPredicted RBP12.05□□□□□ -0.48
CDC42-202ENST00000344548 A0A1W2PPL8 197 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 MAGEB3O15480 346 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 NME2P1O60361 137 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 SLC2A2P11168 524 aaPredicted RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 NME2P22392 152 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 S100A5P33763 92 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 MEOX1P50221 254 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 ROM1Q03395 351 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 CEP78Q5JTW2 689 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 THEM4Q5T1C6 240 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 SLC25A25Q6KCM7 469 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 UNQ9370/PRO34162Q6UXP9 181 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 KCTD20Q7Z5Y7 419 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 GLB1L2Q8IW92 636 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 ZNF679Q8IYX0 411 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 KCNN2Q9H2S1 579 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 SEC61A2Q9H9S3 476 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 NOX4Q9NPH5 578 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 V9GYH0 126 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 ZNF716A6NP11 495 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 EIF1BO60739 113 aaKnown RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 ZNF432O94892 652 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 HPNP05981 417 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 TACSTD2P09758 323 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 POU3F2P20265 443 aaPredicted RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 CD40LGP29965 261 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 SOX2P48431 317 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 MTNR1BP49286 362 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 PPP5CP53041 499 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 CSNK2A1P68400 391 aaPredicted RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 SRYQ05066 204 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 FAM220AQ7Z4H9 259 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 TMEM123Q8N131 208 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 OR52N5Q8NH56 324 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 KCNE4Q8WWG9 221 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 MNTQ99583 582 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 GFI1Q99684 422 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
CDC42-202ENST00000344548 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 UGT2A1Q9Y4X1 527 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 LIPGQ9Y5X9 500 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
CDC42-202ENST00000344548 A0A0B4J203 849 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 DCDC2BA2VCK2 349 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 ZNF726A6NNF4 738 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 TBX1O43435 398 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 GLSO94925 669 aaPredicted RBP12.03□□□□□ -0.48
CDC42-202ENST00000344548 CD1AP06126 327 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 UCHL1P09936 223 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 ZNF823P16415 610 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 LAP3P28838 519 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 THBS2P35442 1172 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CAPZA2P47755 286 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 LHX2P50458 406 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 BLVRAP53004 296 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 SOX8P57073 446 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 RTP5Q14D33 572 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 ZNF79Q15937 498 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 C3AR1Q16581 482 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 DNM1P34Q6PK57 102 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CFAP77Q6ZQR2 320 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 ESPNLQ6ZVH7 1005 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 KRT77Q7Z794 578 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 OR5AK2Q8NH90 309 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms