RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CALB2P22676 271 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 IFNGR2P38484 337 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 RAD52P43351 418 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 LCN6P62502 163 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 KRTAP1-1Q07627 177 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 KRR1Q13601 381 aaKnown RBP13.83□□□□□ -0.19
ATG4B-201ENST00000344376 SEC23BQ15437 767 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 MTX3Q5HYI7 312 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 UNQ6126/PRO20091Q6UXV3 157 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 ALDH16A1Q8IZ83 802 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 ZNF540Q8NDQ6 660 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 Q96M85 177 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 GPX7Q96SL4 187 aaPredicted RBP13.83□□□□□ -0.19
ATG4B-201ENST00000344376 BCL2L14Q9BZR8 327 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 MS4A5Q9H3V2 200 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 REV1Q9UBZ9 1251 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 DUSP13Q9UII6 198 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 GPR160Q9UJ42 338 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 TMCC3Q9ULS5 477 aa13.83□□□□□ -0.19
ATG4B-201ENST00000344376 ZANQ9Y493 2812 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 A0A096LNT2 108 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 TEX13CA0A0J9YWL9 993 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 PRSS37A4D1T9 235 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 PTP4A3O75365 173 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 LCKP06239 509 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 DAOP14920 347 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 USF1P22415 310 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-201ENST00000344376 STOMP27105 288 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 APEX1P27695 318 aaKnown RBP13.83□□□□□ -0.2
ATG4B-201ENST00000344376 LAP3P28838 519 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 SDHAP31040 664 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 GDI2P50395 445 aaKnown RBP13.83□□□□□ -0.2
ATG4B-201ENST00000344376 RPS6KA3P51812 740 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 TMEM249Q2WGJ8 235 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 MESTQ5EB52 335 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 DPY19L2P2Q6ZN68 376 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 FOXL2NBQ6ZUU3 175 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 FAM122BQ7Z309 247 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 ADCK1Q86TW2 530 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 PAQR4Q8N4S7 273 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-201ENST00000344376 C11orf40Q8WZ69 217 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 OR51B6Q9H340 312 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 MUC13Q9H3R2 512 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 IL1RAPQ9NPH3 570 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
ATG4B-201ENST00000344376 FZR1Q9UM11 496 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 TIMM10BQ9Y5J6 103 aa13.83□□□□□ -0.2
ATG4B-201ENST00000344376 CSPG4Q6UVK1 2322 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 TLN2Q9Y4G6 2542 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ARFGEF3Q5TH69 2177 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 C12orf71A8MTZ7 269 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 OR10H3O60404 316 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 DNAJC8O75937 253 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ZNF26P17031 533 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-201ENST00000344376 CCNOP22674 350 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 RRM2P31350 389 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 NR4A2P43354 598 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 UCP2P55851 309 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 GGTLC2Q14390 218 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 MSMPQ1L6U9 139 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 IQCCQ4KMZ1 466 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 SMARCD3Q6STE5 483 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 CYP2R1Q6VVX0 501 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ZCCHC24Q8N2G6 241 aaKnown RBP13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ICA1LQ8NDH6 482 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 FANK1Q8TC84 345 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 FUZQ9BT04 418 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 WACQ9BTA9 647 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 TPK1Q9H3S4 243 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 NRIP3Q9NQ35 241 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 YAE1D1Q9NRH1 226 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ACTR3BQ9P1U1 418 aa13.82□□□□□ -0.2
ATG4B-201ENST00000344376 ALDH3B1P43353 468 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 KLF3P57682 345 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-201ENST00000344376 PSG4Q00888 419 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 NKPD1Q17RQ9 610 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 SYT9Q86SS6 491 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 CPEB3Q8NE35 698 aaKnown RBP13.81□□□□□ -0.2
ATG4B-201ENST00000344376 AKR7LQ8NHP1 331 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 SYNPRQ8TBG9 265 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 UBASH3BQ8TF42 649 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 SNX33Q8WV41 574 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 RASD2Q96D21 266 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 OR2H1Q9GZK4 316 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 POLE4Q9NR33 117 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 IL20RAQ9UHF4 553 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 IER3IP1Q9Y5U9 82 aa13.81□□□□□ -0.2
ATG4B-201ENST00000344376 NAV3Q8IVL0 2385 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 C5orf49A4QMS7 147 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 VWC2LB2RUY7 222 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 SOCS2O14508 198 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 KHDRBS3O75525 346 aaKnown RBP13.8□□□□□ -0.2
ATG4B-201ENST00000344376 ATP5HO75947 161 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 KRT36O76013 467 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 STAMBPO95630 424 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
ATG4B-201ENST00000344376 FPR3P25089 353 aa13.8□□□□□ -0.2
ATG4B-201ENST00000344376 SLC6A6P31641 620 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms