RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 POU3F3P20264 500 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 DNASE1P24855 282 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 EIF1AXP47813 144 aaKnown RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 CXCL12P48061 93 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 DHPSP49366 369 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 RAG2P55895 527 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 ANGPT1Q15389 498 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 RAB11BQ15907 218 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 MS4A18Q3C1V0 323 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 KCTD18Q6PI47 426 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 LRFN4Q6PJG9 635 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 BIVMQ86UB2 503 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 OR2T35Q8NGX2 323 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 DLL4Q9NR61 685 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 RABL2AQ9UBK7 228 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 PCDHGA5Q9Y5G8 931 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 ALOX12BO75342 701 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 CTAG2O75638 210 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 PI4KAP42356 2102 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 TLE3Q04726 772 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 C2orf76Q3KRA6 126 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 TMEM71Q6P5X7 295 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 DCXRQ7Z4W1 244 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 OR52N5Q8NH56 324 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 FAM3DQ96BQ1 224 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 EIF3KQ9UBQ5 218 aaKnown RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 CGGBP1Q9UFW8 167 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 NAP1L6A6NFF2 107 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 ANKUB1A6NFN9 424 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 XRCC3O43542 346 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 ZNF823P16415 610 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 CRABP1P29762 137 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 C17orf67Q0P5P2 114 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 C19orf57Q0VDD7 668 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 INPP5JQ15735 1006 aaPredicted RBP13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 NFAM1Q8NET5 270 aaPredicted RBP13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 OR4D10Q8NGI6 311 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 OR5M1Q8NGP8 315 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 CENPMQ9NSP4 180 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 KIF26BQ2KJY2 2108 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 LOC101059948A0A1B0GTJ6 334 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 GGT3PA6NGU5 568 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 K7ESF4 209 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 ZNF81P51508 661 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 GNG2P59768 71 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 CCL7P80098 99 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 MRPS10P82664 201 aaKnown RBP13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 TEX30Q5JUR7 227 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 TMEM225Q6GV28 225 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 NLRC3Q7RTR2 1065 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 EID2Q8N6I1 236 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 OR51A2Q8NGJ7 313 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 OR8S1Q8NH09 359 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 ZNF436Q9C0F3 470 aaPredicted RBP13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 ATG5Q9H1Y0 275 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 APMAPQ9HDC9 416 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 CACNA1EQ15878 2313 aa13.35□□□□□ -0.27
VIPAS39-202ENST00000343765 A0A1W2PQM1 296 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 DCDC2BA2VCK2 349 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 LMX1BO60663 402 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 RBBP9O75884 186 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 BLVRAP53004 296 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 EMP2P54851 167 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 ROM1Q03395 351 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 CAMK2DQ13557 499 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 ELFN2Q5R3F8 820 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 OLFML2AQ68BL7 652 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 FDX2Q6P4F2 183 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 ZNF767PQ75MW2 155 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 CATSPERDQ86XM0 798 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 OR52B4Q8NGK2 314 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 ASB10Q8WXI3 467 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 MGAT4CQ9UBM8 478 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 CKLFQ9UBR5 152 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 WNT16Q9UBV4 365 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 A0A1B0GTQ1 180 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 IGHMP01871 453 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 SPOCK1Q08629 439 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 HSPB2Q16082 182 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 METTL11BQ5VVY1 283 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 LCN10Q6JVE6 187 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 ANKRD16Q6P6B7 361 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 H1FNTQ75WM6 255 aaPredicted RBP13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 RABEPKQ7Z6M1 372 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 MISPQ8IVT2 679 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 OR13C3Q8NGS6 347 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 DVL3Q92997 716 aaPredicted RBP13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 SLC25A44Q96H78 314 aaPredicted RBP13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 DIABLOQ9NR28 239 aa13.34□□□□□ -0.27
VIPAS39-202ENST00000343765 A0A1B0GVI7 797 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 GDF9O60383 454 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms