RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CDRT1O95170 752 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 GYPBP06028 91 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 ZNF708P17019 499 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 POU3F2P20265 443 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 CFL1P23528 166 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 KIR2DL3P43628 341 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 AGFG1P52594 562 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 GPR139Q6DWJ6 353 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 ESPNLQ6ZVH7 1005 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 EXD3Q8N9H8 876 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 FAM98AQ8NCA5 519 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 OR10D3Q8NH80 312 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 NEIL3Q8TAT5 605 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 TM9SF4Q92544 642 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 MIXL1Q9H2W2 232 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 TXNL4BQ9NX01 149 aaKnown RBP13.1□□□□□ -0.31
CXCL12-201ENST00000343575 MED29Q9NX70 200 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 GRHPRQ9UBQ7 328 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 ADAM30Q9UKF2 790 aa13.1□□□□□ -0.31
CXCL12-201ENST00000343575 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 LOC102725191A0A1B0GVB3 256 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 GJE1A6NN92 205 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-201ENST00000343575 H7C1C5 153 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
CXCL12-201ENST00000343575 OR6A2O95222 327 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-201ENST00000343575 IFNGR1P15260 489 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 ZNF3P17036 446 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 UCNP55089 124 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 RAC3P60763 192 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 LCN6P62502 163 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 HSF1Q00613 529 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 MELKQ14680 651 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 TATDN3Q17R31 274 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 VASNQ6EMK4 673 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 ASB18Q6ZVZ8 466 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 OR5H6Q8NGV6 325 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 ZNF845Q96IR2 970 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-201ENST00000343575 TSSK2Q96PF2 358 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 TSPAN10Q9H1Z9 355 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-201ENST00000343575 SPRR3Q9UBC9 169 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-201ENST00000343575 NUP50Q9UKX7 468 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 TP53TG5Q9Y2B4 290 aa13.09□□□□□ -0.31
CXCL12-201ENST00000343575 NPIPB13A6NJU9 1138 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 SNTNA6NMZ2 147 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 NPIPB4C9JG80 1138 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 ACOT7O00154 380 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 PLA2G10O15496 165 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 TRAF3IP2O43734 574 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 CXCL13O43927 109 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 IFNGP01579 166 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 IGHG3P01860 377 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 MYL12AP19105 171 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 HTR1FP30939 366 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 CDH11P55287 796 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 CARD18P57730 90 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 BTG1P62324 171 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 CXADRP78310 365 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 POU3F1Q03052 451 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 HNRNPA0Q13151 305 aaKnown RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 LINC00303Q3SY05 128 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 PLEKHN1Q494U1 663 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 KLHL22Q53GT1 634 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 HBMQ6B0K9 141 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 LEG1Q6P5S2 330 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 SIAH3Q8IW03 269 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 OR2V1Q8NHB1 315 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 TEAD3Q99594 435 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 SOSTQ9BQB4 213 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 MARVELD1Q9BSK0 173 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 A0A0G2JMP0 313 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 APOL3O95236 402 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 RAB36O95755 333 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 SLC2A2P11168 524 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 ACVR1BP36896 505 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 MTNR1AP48039 350 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 CSNK2A1P68400 391 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 DOC2BQ14184 412 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 TMEM225Q6GV28 225 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 SLC35D2Q76EJ3 337 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 MEPCEQ7L2J0 689 aaKnown RBP13.08□□□□□ -0.32
CXCL12-201ENST00000343575 ASB10Q8WXI3 467 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 OTULINQ96BN8 352 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 OXGR1Q96P68 337 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 TIMP4Q99727 224 aa13.08□□□□□ -0.32
CXCL12-201ENST00000343575 OR51V1Q9H2C8 321 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms