RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 GDF7Q7Z4P5 450 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 UBE3DQ7Z6J8 389 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TAF8Q7Z7C8 310 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TMPRSS12Q86WS5 348 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 MEX3DQ86XN8 651 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 SLC35F2Q8IXU6 374 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 BPIFB2Q8N4F0 458 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PAQR4Q8N4S7 273 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 FRMD1Q8N878 549 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ACOT4Q8N9L9 421 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 OR6J1Q8NGC5 347 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 LYPD6BQ8NI32 183 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF417Q8TAU3 575 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 NUBPLQ8TB37 319 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 GPX8Q8TED1 209 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 RSPRY1Q96DX4 576 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 MCHR1Q99705 422 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 SMAD5Q99717 465 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 MED20Q9H944 212 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 SIDT1Q9NXL6 827 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 GNG8Q9UK08 70 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TBX21Q9UL17 535 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 C5orf42Q9H799 3197 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 COL4A6Q14031 1691 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 A8MWP6 167 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 NARSO43776 548 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CTAG2O75638 210 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 DUS4LO95620 317 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TSPAN15O95858 294 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TACSTD2P09758 323 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZGLP1P0C6A0 271 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 IL9P15248 144 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZBTB25P24278 435 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TBPL1P62380 186 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CLN3Q13286 438 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 OR7A5Q15622 319 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PRSS53Q2L4Q9 553 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF750Q32MQ0 723 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 AMZ1Q400G9 498 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 SAPCD1Q5SSQ6 148 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 AKR1C8PQ5T2L2 129 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ADGRF1Q5T601 910 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PRSS54Q6PEW0 395 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 STAC2Q6ZMT1 411 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF574Q6ZN55 896 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TPRG1Q6ZUI0 275 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TMCO2Q7Z6W1 182 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CCDC54Q8NEL0 328 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 LFNGQ8NES3 379 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF461Q8TAF7 563 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PRAP1Q96NZ9 151 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CCNL2Q96S94 520 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 NRSN2Q9GZP1 204 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CHST6Q9GZX3 395 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 UBE2ZQ9H832 354 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TAF9BQ9HBM6 251 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ANKRD10Q9NXR5 420 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CACNG4Q9UBN1 327 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 KCNG2Q9UJ96 466 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ADAM29Q9UKF5 820 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PLXNB3Q9ULL4 1909 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 MTCL1Q9Y4B5 1905 aaKnown RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 A0A087WWC5 75 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 TSPAN11A1L157 253 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 C5orf51A6NDU8 294 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 EPOPA6NHQ4 379 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 IFITM10A6NMD0 228 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF736B4DX44 427 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 UMAD1C9J7I0 102 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 SAP18O00422 153 aaKnown RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 OR1F1O43749 312 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 IGSF6O95976 241 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 AGR2O95994 175 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 CST4P01036 141 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 ACRP10323 421 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 CSF2RAP15509 400 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 RPS2P15880 293 aaKnown RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 IGFBP6P24592 240 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 SLC6A6P31641 620 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 AQP2P41181 271 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 LPAR6P43657 344 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 CLDN12P56749 244 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 ADAM8P78325 824 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 IL13RA1P78552 427 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 CRMP1Q14194 572 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 ELOCQ15369 112 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 MESTQ5EB52 335 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 ARHGAP40Q5TG30 622 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 CRTC1Q6UUV9 634 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 OR2A12Q8NGT7 310 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 OR6K2Q8NGY2 324 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms