RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MMP21Q8N119 569 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 PPP1R35Q8TAP8 253 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 ADAT3Q96EY9 351 aaPredicted RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 SEC22AQ96IW7 307 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 MSLNLQ96KJ4 702 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 TAAR1Q96RJ0 339 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 F8P00451 2351 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SOCS5O75159 536 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SORBS2O94875 1100 aaKnown RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 COX5AP20674 150 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 FPR3P25089 353 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 INHBCP55103 352 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 HLXQ14774 488 aaPredicted RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 TUSC1Q2TAM9 212 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TIGD5Q53EQ6 642 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ZNF805Q5CZA5 627 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 LANCL3Q6ZV70 420 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SLC24A5Q71RS6 500 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ZNF100Q8IYN0 542 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 NAGSQ8N159 534 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ARRDC4Q8NCT1 418 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 KCTD13Q8WZ19 329 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SAMD8Q96LT4 415 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 C1QTNF2Q9BXJ5 285 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 MUTYHQ9UIF7 546 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 A6NIN4 97 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ANKRD30BLA7E2S9 258 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ZNF487B1APH4 448 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 HAND1O96004 215 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR5G3P0C626 314 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ZNF888P0CJ79 500 aaPredicted RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 DRD2P14416 443 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 AOAHP28039 575 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 FAM3BP58499 235 aaPredicted RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 HERVK_113P61574 105 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ARF6P62330 175 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 CEACAM7Q14002 265 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TECRLQ5HYJ1 363 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TAS1R3Q7RTX0 852 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR51S1Q8NGJ8 323 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 LRRC3BQ96PB8 259 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TAC3Q9UHF0 121 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR52A1Q9UKL2 312 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SDHDO14521 159 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TNFRSF10CO14798 259 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ST8SIA3O43173 380 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ZNF30P17039 623 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OTX2P32243 289 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 RPS25P62851 125 aaKnown RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 H2BFWTQ7Z2G1 175 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TMEM183AQ8IXX5 376 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ADGRG5Q8IZF4 528 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SFRP2Q96HF1 295 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ABCA3Q99758 1704 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 KDM4FA0A1W2PPD8 638 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 F2P00734 622 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 AHSGP02765 367 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR5AL1P0C617 328 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 RPL12P30050 165 aaKnown RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 CPOXP36551 454 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 DCTP40126 519 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 CSNK1G2P78368 415 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 MS4A2Q01362 244 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 CXCL9Q07325 125 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 RTL8BQ17RB0 113 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 NSUN5P2Q63ZY6 315 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 GALNT16Q8N428 558 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SLC38A9Q8NBW4 561 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 NLGN4YQ8NFZ3 816 aaPredicted RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR9A1PQ8NGU1 263 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR1F2PQ96R84 312 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OCEL1Q9H607 264 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 HEMK1Q9Y5R4 338 aaPredicted RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 CPNE6O95741 557 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SLC35E2BP0CK96 405 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 PSMB10P40306 273 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 Q499Y3 187 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 FAM74A3Q4VXF1 159 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 CYHR1Q6ZMK1 362 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 NAXDQ8IW45 347 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 SLC22A24Q8N4F4 322 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 OR52N2Q8NGI0 321 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 TMEM106AQ96A25 262 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 PINX1Q96BK5 328 aaKnown RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 ZMYND19Q96E35 227 aaPredicted RBP5.71□□□□□ -1.5
VCAN-203ENST00000343200 DMRT1Q9Y5R6 373 aa5.71□□□□□ -1.5
VCAN-203ENST00000343200 ANKRD61A6NGH8 418 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SLC16A5O15375 505 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SLC31A1O15431 190 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 MBTPS2O43462 519 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 UTS2O95399 124 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 EIF4EP06730 217 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 GM2AP17900 193 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 FBLP22087 321 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 RXRBP28702 533 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TCL1AP56279 114 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SLC10A2Q12908 348 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 GRB7Q14451 532 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 UNC50Q53HI1 259 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 RPS26P11Q5JNZ5 115 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms