RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 VSX1Q9NZR4 365 aaPredicted RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 PLPP3O14495 311 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 SULT1B1O43704 296 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 SLC16A7O60669 478 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 KRT33AO76009 404 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 HLA-DQA2P01906 255 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 MAS1P04201 325 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 RAB40ALP0C0E4 278 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 CDK2P24941 298 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 CENPAP49450 140 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 PLA2G7Q13093 441 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 PCOLCEQ15113 449 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 MEP1BQ16820 701 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 ST3GAL2Q16842 350 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 COL28A1Q2UY09 1125 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 SLC35D2Q76EJ3 337 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 PIP4P1Q86T03 277 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 OR8K3Q8NH51 312 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 ZNF417Q8TAU3 575 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 STK35Q8TDR2 534 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 GPR148Q8TDV2 347 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 RAB40AQ8WXH6 277 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 MIB2Q96AX9 1013 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 S100A16Q96FQ6 103 aaKnown RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 OR8B4Q96RC9 309 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 ZNF587Q96SQ5 575 aaPredicted RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 COL25A1Q9BXS0 654 aaPredicted RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 ELOVL3Q9HB03 270 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 KLHL9Q9P2J3 617 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 ETV7Q9Y603 341 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 EXPH5Q8NEV8 1989 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 H0YC42 278 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 ZNF354AO60765 605 aaPredicted RBP13.47□□□□□ -0.25
TPM3-208ENST00000341485 IGHEP01854 428 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 IGHMP01871 453 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 RAF1P04049 648 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 PTHLHP12272 177 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 CTLA4P16410 223 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 CXCL3P19876 107 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 CSRP1P21291 193 aaKnown RBP13.47□□□□□ -0.25
TPM3-208ENST00000341485 ART1P52961 327 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 MELKQ14680 651 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 ETFDHQ16134 617 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 SFRP4Q6FHJ7 346 aaPredicted RBP13.47□□□□□ -0.25
TPM3-208ENST00000341485 FDX2Q6P4F2 183 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 GRPEL2Q8TAA5 225 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 TMEM106AQ96A25 262 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 HYLS1Q96M11 299 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 NPAS1Q99742 590 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 DEFB126Q9BYW3 111 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 C20orf85Q9H1P6 137 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 ZNF275Q9NSD4 429 aaPredicted RBP13.47□□□□□ -0.25
TPM3-208ENST00000341485 KLK11Q9UBX7 282 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 ZNF222Q9UK12 451 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 HSPB11Q9Y547 144 aa13.47□□□□□ -0.25
TPM3-208ENST00000341485 IGHV1-45A0A0A0MS14 117 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 SLC22A23A1A5C7 686 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 ANKRD34BA5PLL1 514 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 ANXA2P2A6NMY6 339 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 C9orf172C9J069 976 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.25
TPM3-208ENST00000341485 TMIGD3P0DMS9 266 aaPredicted RBP13.46□□□□□ -0.25
TPM3-208ENST00000341485 TCN2P20062 427 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 IL11P20809 199 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 GALK2Q01415 458 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 C9orf62Q8N4C0 152 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 BEST4Q8NFU0 473 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 OR56B4Q8NH76 319 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 FCAMRQ8WWV6 532 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 MCHR2Q969V1 340 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 ZFP64Q9NPA5 681 aa13.46□□□□□ -0.25
TPM3-208ENST00000341485 C2orf72A6NCS6 295 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 GPR171O14626 319 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 AHSA1O95433 338 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 ECDO95905 644 aaPredicted RBP13.46□□□□□ -0.26
TPM3-208ENST00000341485 SPARCP09486 303 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 MNDAP41218 407 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 TAS2R20P59543 309 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 SLC18B1Q6NT16 456 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 TIPARPQ7Z3E1 657 aaKnown RBP13.46□□□□□ -0.26
TPM3-208ENST00000341485 GLRX5Q86SX6 157 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 CT55Q8WUE5 264 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 ASB17Q8WXJ9 295 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 ZNF700Q9H0M5 742 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 IRF2BPLQ9H1B7 796 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 BEX1Q9HBH7 125 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 STMN3Q9NZ72 180 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 FLVCR2Q9UPI3 526 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 SLC22A13Q9Y226 551 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 HS3ST3B1Q9Y662 390 aa13.46□□□□□ -0.26
TPM3-208ENST00000341485 SPEGQ15772 3267 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms