RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FOLR1P15328 257 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 CSF2RBP32927 897 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 GLO1Q04760 184 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 MFGE8Q08431 387 aaPredicted RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 GRK1Q15835 563 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 RAB11BQ15907 218 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 ETFDHQ16134 617 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 TOR2AQ5JU69 321 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 CLLU1Q5K131 121 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 ARHGAP40Q5TG30 622 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 BIVMQ86UB2 503 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 ZNF587Q96SQ5 575 aaPredicted RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 PCED1AQ9H1Q7 454 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 GTF2A1LQ9UNN4 478 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 DHDHQ9UQ10 334 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 PHF3Q92576 2039 aaKnown RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 OR2M5A3KFT3 312 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 DUX1O43812 170 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 OR2T1O43869 369 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 CRYZL1O95825 349 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 MAP2K6P52564 334 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 RIDAP52758 137 aaKnown RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 SSBP1Q04837 148 aaKnown RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 TOMM20Q15388 145 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 CSRP2Q16527 193 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 C2orf76Q3KRA6 126 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 OR7E24Q6IFN5 339 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
TDP2-201ENST00000341060 CATSPERDQ86XM0 798 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 OR6N1Q8NGY5 312 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 ASB5Q8WWX0 329 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 SLC41A2Q96JW4 573 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 GINS4Q9BRT9 223 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 ABHD6Q9BV23 337 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 SEMA4CQ9C0C4 833 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 OR11A1Q9GZK7 315 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 CDCP1Q9H5V8 836 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 LRP12Q9Y561 859 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 PLSCR5A0PG75 271 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 FTCDNL1E5RQL4 147 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 ADAM10O14672 748 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 RAD1O60671 282 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 PIAS2O75928 621 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 KDM4BO94953 1096 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 AHSA1O95433 338 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 WNT11O96014 354 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 CD2P06729 351 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 FSTP19883 344 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 CRABP1P29762 137 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 EIF2B1Q14232 305 aaKnown RBP13.08□□□□□ -0.32
TDP2-201ENST00000341060 MELKQ14680 651 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 LANCL3Q6ZV70 420 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 SLC36A1Q7Z2H8 476 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 OR4D10Q8NGI6 311 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 OR1J4Q8NGS1 313 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 TMPRSS13Q9BYE2 586 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 GLTPQ9NZD2 209 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 SEMA5BQ9P283 1151 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 CKLFQ9UBR5 152 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 MAB21L2Q9Y586 359 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 ARID1BQ8NFD5 2236 aaPredicted RBP13.08□□□□□ -0.32
TDP2-201ENST00000341060 RALGAPA1Q6GYQ0 2036 aa13.08□□□□□ -0.32
TDP2-201ENST00000341060 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 TMEM272A0A1B0GTI8 110 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 SNAPC5O75971 98 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 CFDP00746 253 aaPredicted RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 AKAIN1P0CW23 69 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 VSIG10L2P0DP72 767 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 C4BPBP20851 252 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 SLC26A5P58743 744 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 GUCA2AQ02747 115 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 C1orf189Q5VU69 101 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 BPHLQ86WA6 291 aaPredicted RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 OR52B4Q8NGK2 314 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 DUSP19Q8WTR2 217 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 PPP1R14AQ96A00 147 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 DPYSL5Q9BPU6 564 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 PPIEQ9UNP9 301 aaKnown RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 UBE2QL1A1L167 161 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 SHOXO15266 292 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 SRSF10O75494 262 aaKnown RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 ENPP1P22413 925 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 PRSS3P35030 304 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 POU4F3Q15319 338 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 FAM209AQ5JX71 171 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 YOD1Q5VVQ6 348 aaPredicted RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 GLT8D1Q68CQ7 371 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 MISPQ8IVT2 679 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 CLEC1AQ8NC01 280 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms