RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 C21orf140B9A014 251 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SLC17A3O00476 420 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SUSD5O60279 629 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ACTL6AO96019 429 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 APEHP13798 732 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 AZGP1P25311 298 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 EPHA8P29322 1005 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 HYAL1Q12794 435 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM115Q12893 351 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PARM1Q6UWI2 310 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 IRF2BP2Q7Z5L9 587 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR2L13Q8N349 312 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 FAM181AQ8N9Y4 354 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM104Q8NE00 496 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR52N2Q8NGI0 321 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 THAP3Q8WTV1 239 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 EMG1Q92979 244 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 WDR34Q96EX3 536 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ADTRPQ96IZ2 230 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PIWIL1Q96J94 861 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OSER1Q9NX31 292 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 EXTL2Q9UBQ6 330 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 STYXL1Q9Y6J8 313 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PLXNA2O75051 1894 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MEIOCA2RUB1 952 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 A6NDN8 102 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 A8MT66 165 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF587BE7ETH6 402 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 GSTP1P09211 210 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CPN1P15169 458 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 UCP3P55916 312 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ACSM1Q08AH1 577 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MEP1BQ16820 701 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ACOT7LQ6ZUV0 252 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 NRARPQ7Z6K4 114 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF695Q8IW36 515 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ASB12Q8WXK4 309 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CELF6Q96J87 481 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SLC25A33Q9BSK2 321 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PROCRQ9UNN8 238 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 K7EPK0 472 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 HYAL3O43820 417 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SNNO75324 88 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 HOXD4P09016 255 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PRSS56P0CW18 603 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 DRD5P21918 477 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PSMB4P28070 264 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 GCGRP47871 477 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TCL1AP56279 114 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 WNT7BP56706 349 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CTXN1P60606 82 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 KCNAB2Q13303 367 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SERPINA9Q86WD7 417 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 LGI3Q8N145 548 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 POGLUT1Q8NBL1 392 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR8J2Q8NGG1 315 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR8K3Q8NH51 312 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR52J3Q8NH60 311 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 VSTM2AQ8TAG5 236 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 APOLD1Q96LR9 279 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CTDSP1Q9GZU7 261 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PELI2Q9HAT8 420 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 FREM3P0C091 2139 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TRBC2A0A5B9 178 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MPDU1O75352 247 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 GUSBP08236 651 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PGA4P0DJD7 388 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PGA5P0DJD9 388 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 COX5AP20674 150 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR12D2P58182 307 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 RELBQ01201 579 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 LY6DQ14210 128 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PHYHD1Q5SRE7 291 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 THNSL2Q86YJ6 484 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR5M8Q8NGP6 311 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SCARB1Q8WTV0 552 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PRRC1Q96M27 445 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35A5Q9BS91 424 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SLC25A18Q9H1K4 315 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 LIN7CQ9NUP9 197 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ASIC5Q9NY37 505 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 LPAR3Q9UBY5 353 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 FOXD3Q9UJU5 478 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF337Q9Y3M9 751 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM210A6NLX4 147 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CBR3O75828 277 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 GOT2P00505 430 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SHBGP04278 402 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 H2BFMP0C1H6 154 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ANKRD34CP0C6C1 535 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ACSM4P0C7M7 580 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 AREGP15514 252 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 JUNBP17275 347 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TIA1P31483 386 aaKnown RBP eCLIP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ETV3P41162 512 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 P2RX1P51575 399 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 IHHQ14623 411 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 GTDC1Q4AE62 458 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C22orf39Q6P5X5 142 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 HSD17B13Q7Z5P4 300 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms