RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 NANOGP8Q6NSW7 305 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.29
LINC01116-202ENST00000339037 HDDC2Q7Z4H3 204 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 TREML1Q86YW5 311 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 SLC30A8Q8IWU4 369 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 CPEB3Q8NE35 698 aaKnown RBP13.27□□□□□ -0.29
LINC01116-202ENST00000339037 SEPHS2Q99611 448 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 MRPL13Q9BYD1 178 aaKnown RBP13.27□□□□□ -0.29
LINC01116-202ENST00000339037 KCNN2Q9H2S1 579 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 C7orf69Q9H7B7 122 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 NANOGQ9H9S0 305 aa13.27□□□□□ -0.29
LINC01116-202ENST00000339037 CENPBD1B2RD01 187 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 SPRY3O43610 288 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 MGRN1O60291 552 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 PRSS23O95084 383 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 IGHV1-46P01743 117 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 F13BP05160 661 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 FPR2P25090 351 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 STOMP27105 288 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 GCH1P30793 250 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 DAP3P51398 398 aaKnown RBP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 LCN2P80188 198 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 RPL18Q07020 188 aaKnown RBP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 SF3A3Q12874 501 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 CGB2Q6NT52 195 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 UNQ6126/PRO20091Q6UXV3 157 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 ZNF101Q8IZC7 436 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 ZDHHC22Q8N966 263 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 SLC26A7Q8TE54 656 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 IPCEF1Q8WWN9 437 aaPredicted RBP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 C22orf15Q8WYQ4 148 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 PCDHAC1Q9H158 963 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 SIAEQ9HAT2 523 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 NTN4Q9HB63 628 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 CCNB1IP1Q9NPC3 277 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 MEPEQ9NQ76 525 aaPredicted RBP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 DDX28Q9NUL7 540 aaKnown RBP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 UBAP1Q9NZ09 502 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 EIF3KQ9UBQ5 218 aaKnown RBP13.26□□□□□ -0.29
LINC01116-202ENST00000339037 OPN4Q9UHM6 478 aa13.26□□□□□ -0.29
LINC01116-202ENST00000339037 C5orf49A4QMS7 147 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 FSHBP01225 129 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 TNFRSF1BP20333 461 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 MPV17P39210 176 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 MMP15P51511 669 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 UBA52P62987 128 aaKnown RBP13.25□□□□□ -0.29
LINC01116-202ENST00000339037 MRPS34P82930 218 aaKnown RBP13.25□□□□□ -0.29
LINC01116-202ENST00000339037 SLC3A1Q07837 685 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 ZNF718Q3SXZ3 478 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 C10orf128Q5T292 105 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
LINC01116-202ENST00000339037 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
LINC01116-202ENST00000339037 CCDC80Q76M96 950 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 CALHM3Q86XJ0 350 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 ASB10Q8WXI3 467 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 MARS2Q96GW9 593 aaKnown RBP13.25□□□□□ -0.29
LINC01116-202ENST00000339037 PRSS27Q9BQR3 290 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 EGLN1Q9GZT9 426 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 FGFR1OP2Q9NVK5 253 aa13.25□□□□□ -0.29
LINC01116-202ENST00000339037 STX18Q9P2W9 335 aaKnown RBP13.25□□□□□ -0.29
LINC01116-202ENST00000339037 ZSCAN5BA6NJL1 495 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 TRMUO75648 421 aaKnown RBP13.24□□□□□ -0.29
LINC01116-202ENST00000339037 UBOX5O94941 541 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 SLC2A10O95528 541 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 MT-ND1P03886 318 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 ACADSP16219 412 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 ZNF32P17041 273 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 CDAP32320 146 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 WNT5AP41221 380 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 ZNF133P52736 654 aaPredicted RBP13.24□□□□□ -0.29
LINC01116-202ENST00000339037 UGT2B15P54855 530 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 KLF10Q13118 480 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 CYLC2Q14093 348 aaPredicted RBP13.24□□□□□ -0.29
LINC01116-202ENST00000339037 TMEM255AQ5JRV8 349 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 KLF14Q8TD94 323 aaPredicted RBP13.24□□□□□ -0.29
LINC01116-202ENST00000339037 ST7LQ8TDW4 575 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 POM121L2Q96KW2 1035 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 OR2J1Q9GZK6 312 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 INIPQ9NRY2 104 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 CYSLTR2Q9NS75 346 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 CGGBP1Q9UFW8 167 aaPredicted RBP13.24□□□□□ -0.29
LINC01116-202ENST00000339037 SH3GLB1Q9Y371 365 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 PCDHGB1Q9Y5G3 927 aa13.24□□□□□ -0.29
LINC01116-202ENST00000339037 LOC100509620A0A075B734 347 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 PPIAL4EA0A075B759 164 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 PPIAL4CA0A0B4J2A2 164 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 PPIAL4DF5H284 164 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 MRASO14807 208 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 KCNAB3O43448 404 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 SHOX2O60902 331 aaPredicted RBP13.23□□□□□ -0.29
LINC01116-202ENST00000339037 ADH4P08319 380 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 PPIAL4FP0DN26 164 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 TROVE2P10155 538 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01116-202ENST00000339037 NR2C1P13056 603 aa13.23□□□□□ -0.29
LINC01116-202ENST00000339037 LIPAP38571 399 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms