RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CSF3RQ99062 836 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 FLVCR2Q9UPI3 526 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 PCDHGA5Q9Y5G8 931 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ZNF749O43361 778 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 P2RX1P51575 399 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 FAAP20Q6NZ36 180 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 BCORP1Q8N888 145 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 SLC30A7Q8NEW0 376 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 PLA2G12AQ9BZM1 189 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 HRASLSQ9HDD0 168 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 TAS2R4Q9NYW5 299 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ZNF346Q9UL40 294 aaKnown RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 IGHV3-20A0A0C4DH32 117 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 CCR2P41597 374 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 SSR4P51571 173 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 WNT3P56703 355 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 AGERQ15109 404 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 GOT1L1Q8NHS2 421 aaPredicted RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 POC1BQ8TC44 478 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 PLSCR3Q9NRY6 295 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 CHRNA9Q9UGM1 479 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 CEP290O15078 2479 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ABHD16AO95870 558 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 SOD1P00441 154 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 POU3F3P20264 500 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 RAD52P43351 418 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 SRPXP78539 464 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 TAGLNQ01995 201 aaKnown RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 RPL18Q07020 188 aaKnown RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 C16orf52Q8NHV5 167 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 OCSTAMPQ9BR26 566 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 PIGMQ9H3S5 423 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 PISDQ9UG56 409 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 TRAPPC2LQ9UL33 140 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 A0A087WV62 115 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 A0A1B0GX78 115 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 PHF1O43189 567 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 HRO43593 1189 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 MSR1P21757 451 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 PDLIM3Q53GG5 364 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 EMC4Q5J8M3 183 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 KIAA0907Q7Z7F0 614 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 C22orf15Q8WYQ4 148 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 C19orf12Q9NSK7 152 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 A4GNTQ9UNA3 340 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 LOXHD1Q8IVV2 1947 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 SCN1AP35498 2009 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 ZNF705GA8MUZ8 300 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 TGM1P22735 817 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 PPICP45877 212 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 SFRP5Q5T4F7 317 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 H3F3CQ6NXT2 135 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 BPHLQ86WA6 291 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 ABHD6Q9BV23 337 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 ABCA3Q99758 1704 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 PLSCR5A0PG75 271 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 OIP5O43482 229 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 SPNP16150 400 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 BTG2P78543 158 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 HMGN3Q15651 99 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 WDR88Q6ZMY6 472 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 GLCCI1Q86VQ1 547 aa12.56□□□□□ -0.4
RTN4-202ENST00000337526 C6orf106Q9H6K1 298 aaPredicted RBP12.56□□□□□ -0.4
RTN4-202ENST00000337526 HBE1P02100 147 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 RUNX2Q13950 521 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 DOC2BQ14184 412 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 PRTGQ2VWP7 1150 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
RTN4-202ENST00000337526 ZNF813Q6ZN06 617 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 SEMA4CQ9C0C4 833 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 PRAMEF25A6NGN4 478 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 PRKNO60260 465 aaPredicted RBP12.55□□□□□ -0.4
RTN4-202ENST00000337526 EPXP11678 715 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 OR1D5P58170 312 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 ZNF74Q16587 644 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 PHLDA2Q53GA4 152 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 PXDC1Q5TGL8 231 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 LIPHQ8WWY8 451 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 TAAR8Q969N4 342 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 DOK1Q99704 481 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 WWTR1Q9GZV5 400 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 TAS2R5Q9NYW4 299 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 IL20Q9NYY1 176 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 IGLV3-16A0A075B6K0 115 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 D6RAR5 112 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 ALOX12BO75342 701 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms