RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 VEGFDO43915 354 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 ADRA2AP08913 450 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-201ENST00000337299 LAP3P28838 519 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 SLC46A2Q9BY10 475 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 SLC22A13Q9Y226 551 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 THSD7AQ9UPZ6 1657 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 TMEM212A6NML5 194 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 YIF1AO95070 293 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 PRDX1Q06830 199 aaKnown RBP12.11□□□□□ -0.47
COL2A1-201ENST00000337299 SLC39A11Q8N1S5 342 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 OR1S1Q8NH92 325 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-201ENST00000337299 RRNAD1Q96FB5 475 aaKnown RBP12.11□□□□□ -0.47
COL2A1-201ENST00000337299 MAP3K3Q99759 626 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 NEU3Q9UQ49 428 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 ZFPL1O95159 310 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 GP1BAP07359 652 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 CD37P11049 281 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 SSTP61278 116 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 SKP2Q13309 424 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 TRMT12Q53H54 448 aaKnown RBP12.11□□□□□ -0.47
COL2A1-201ENST00000337299 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 TMEM182Q6ZP80 229 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-201ENST00000337299 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 GIMAP5Q96F15 307 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 EMC9Q9Y3B6 208 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 CBY1Q9Y3M2 126 aa12.11□□□□□ -0.47
COL2A1-201ENST00000337299 K7ESM1 405 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 MT-ND4LP03901 98 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 CTSLP07711 333 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 CPMP14384 443 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 EPHA1P21709 976 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 FCGR2CP31995 323 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 MRPS34P82930 218 aaKnown RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 PMPCAQ10713 525 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 SGCAQ16586 387 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 PLEKHM1Q9Y4G2 1056 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 SLC22A7Q9Y694 548 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 PLSCR5A0PG75 271 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 TMIGD3P0DMS9 266 aaPredicted RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 RPA2P15927 270 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 TBXA2RP21731 343 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 ZNF84P51523 738 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 RNLSQ5VYX0 342 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 FJX1Q86VR8 437 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 DND1Q8IYX4 353 aaKnown RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 AMER3Q8N944 861 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 MITD1Q8WV92 249 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 PHYHIPQ92561 330 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
COL2A1-201ENST00000337299 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 KIAA1217Q5T5P2 1943 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 TRBV5-4A0A0C4DH59 114 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 AP4M1O00189 453 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 MAN2B1O00754 1011 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 GABRR1P24046 479 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 FAM189A2Q15884 450 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 BEND4Q6ZU67 534 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 MARCH5Q9NX47 278 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 TAS2R4Q9NYW5 299 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 ZNF337Q9Y3M9 751 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 RNF215Q9Y6U7 377 aa12.1□□□□□ -0.47
COL2A1-201ENST00000337299 ANKRD20A5PA0PJZ0 165 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 TCAPO15273 167 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 FZD6O60353 706 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 GLSO94925 669 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 NXPH3O95157 252 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 TIMP1P01033 207 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 CD53P19397 219 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 ALOX5APP20292 161 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 HRH1P35367 487 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 IRS1P35568 1242 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 PPP1R1AQ13522 171 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 SLC36A2Q495M3 483 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 MARCH3Q86UD3 253 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 LINC00346Q8IVM7 164 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 GOT1L1Q8NHS2 421 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 SIGLEC11Q96RL6 698 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 KCNJ15Q99712 375 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 IER2Q9BTL4 223 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms