RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 FAM221AA4D161 298 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 RP2O75695 350 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 WDPCPO95876 746 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 THBS1P07996 1170 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 HOXB5P09067 269 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 RFC3P40938 356 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 CCR9P51686 369 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 ZNF41P51814 821 aaPredicted RBP7.46□□□□□ -1.21
HPS4-201ENST00000336873 EFNB2P52799 333 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 FXYD4P59646 89 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 FZD2Q14332 565 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 C14orf28Q4W4Y0 310 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 C3orf33Q6P1S2 294 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 C3P1Q6ZMU1 363 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 YIPF5Q969M3 257 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 FAM3DQ96BQ1 224 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 TREM1Q9NP99 234 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 SDHAF3Q9NRP4 125 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 ZMIZ1Q9ULJ6 1067 aa7.46□□□□□ -1.21
HPS4-201ENST00000336873 TMED7-TICAM2A0A0A6YYA0 188 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TRBV11-1A0A0K0K1C0 115 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 METTL21EPA6NDL7 271 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 ZNF736B4DX44 427 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 ACOT7O00154 380 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 HSPB6O14558 160 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 CRTAPO75718 401 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 GLCEO94923 617 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TAS2R20P59543 309 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 COL28A1Q2UY09 1125 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 SLC36A2Q495M3 483 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 DPY19L2P2Q6ZN68 376 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 OR5T2Q8NGG2 359 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 LCORQ96JN0 433 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 GLTPQ9NZD2 209 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 PILRAQ9UKJ1 303 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 EDARQ9UNE0 448 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TMED7Q9Y3B3 224 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 NPFFR2Q9Y5X5 522 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 COL6A6A6NMZ7 2263 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TCRBV16S1A1N1A0A5B0 115 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 VSTM2BA6NLU5 285 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 GDF9O60383 454 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 CT45A8P0DMV1 189 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 CT45A9P0DMV2 189 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 POU3F2P20265 443 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 ACHEP22303 614 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TNFRSF4P43489 277 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 C2orf76Q3KRA6 126 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 CT45A2Q5DJT8 189 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 KIAA0895LQ68EN5 471 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 ZNF546Q86UE3 836 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 VASH2Q86V25 355 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TPRA1Q86W33 373 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 GVQW1Q8N7I0 195 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 INO80EQ8NBZ0 244 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 OR2G2Q8NGZ5 317 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 ELSPBP1Q96BH3 223 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 NUDT9Q9BW91 350 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 TINAGL1Q9GZM7 467 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 CHST6Q9GZX3 395 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 C8orf33Q9H7E9 229 aaPredicted RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 IFT22Q9H7X7 185 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 SLC2A4RGQ9NR83 387 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 OBP2AQ9NY56 170 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 ABRACLQ9P1F3 81 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 RBM7Q9Y580 266 aaKnown RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 ZNF106Q9H2Y7 1883 aaKnown RBP7.46□□□□□ -1.22
HPS4-201ENST00000336873 PRR14LQ5THK1 2151 aa7.46□□□□□ -1.22
HPS4-201ENST00000336873 KANTRA0A1W2PQU2 76 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 DUX1O43812 170 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 FARS2O95363 451 aaKnown RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 PMP2P02689 132 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 PDGFAP04085 211 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 FOLR1P15328 257 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 IL11P20809 199 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 SERPINA2P20848 420 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 GABRR1P24046 479 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 CBX5P45973 191 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 IL13RA1P78552 427 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 MLC1Q15049 377 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 SGCBQ16585 318 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TMPRSS11FQ6ZWK6 438 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 SP7Q8TDD2 431 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 ADAMTS14Q8WXS8 1223 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ZNF436Q9C0F3 470 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 MS4A7Q9GZW8 240 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 NXF2Q9GZY0 626 aaKnown RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 OR5V1Q9UGF6 321 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 SCP2D1Q9UJQ7 156 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TRAPPC4Q9Y296 219 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TMEM14AQ9Y6G1 99 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 MEX3AA1L020 520 aaKnown RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 PLPP2O43688 288 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 FBXO24O75426 580 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 CFDP00746 253 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 PNMTP11086 282 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 CTLA4P16410 223 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 AVPR2P30518 371 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TRAM1Q15629 374 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TMEM255AQ5JRV8 349 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms