RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CD1CP29017 333 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 PTGS2P35354 604 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 MNDAP41218 407 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 NDUFAF7Q7L592 441 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 OR1J4Q8NGS1 313 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 TGM7Q96PF1 710 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
VPS33B-201ENST00000333371 POFUT1Q9H488 388 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 SLC2A4RGQ9NR83 387 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 MRPL22Q9NWU5 206 aaKnown RBP11.1□□□□□ -0.63
VPS33B-201ENST00000333371 B9D1Q9UPM9 204 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 A0A1B0GTQ1 180 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 DCDC2BA2VCK2 349 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 C10orf142B7Z368 130 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 APEHP13798 732 aaKnown RBP11.1□□□□□ -0.63
VPS33B-201ENST00000333371 CTLA4P16410 223 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 PRSS3P35030 304 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
VPS33B-201ENST00000333371 FNTBP49356 437 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 ZP2Q05996 745 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 UBXN2BQ14CS0 331 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 ZMYND11Q15326 602 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 MOGAT2Q3SYC2 334 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 OR6N1Q8NGY5 312 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 LIPHQ8WWY8 451 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 MRI1Q9BV20 369 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 PTDSS2Q9BVG9 487 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 TMPRSS13Q9BYE2 586 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 TAS2R4Q9NYW5 299 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 ASCC3Q8N3C0 2202 aaKnown RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 CPAMD8Q8IZJ3 1885 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 IGHV1OR15-9A0A0B4J2B8 117 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 OR6C65A6NJZ3 312 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 IL33O95760 270 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 RLN2P04090 185 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 CSF1P09603 554 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 AKAIN1P0CW23 69 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 FAUP35544 74 aaKnown RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 SLC17A1Q14916 467 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 ELOCQ15369 112 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 RAB11BQ15907 218 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 ACKR1Q16570 336 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 FAM74A1Q5RGS3 127 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 STEAP1BQ6NZ63 245 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 TSSK4Q6SA08 328 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 TMEM151BQ8IW70 566 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF440Q8IYI8 595 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 CLEC1AQ8NC01 280 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 LMX1AQ8TE12 382 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 METTL21AQ8WXB1 218 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 OR11A1Q9GZK7 315 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 UBE2ZQ9H832 354 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 APMAPQ9HDC9 416 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 GPR27Q9NS67 375 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 GPR160Q9UJ42 338 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 SPAG17Q6Q759 2223 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 LOC101059948A0A1B0GTJ6 334 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 SLC22A23A1A5C7 686 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 TRIM77I1YAP6 450 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 BGLAPP02818 100 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 IL11P20809 199 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 CXCR1P25024 350 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 CSF2RBP32927 897 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 EGR3Q06889 387 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 NR0B2Q15466 257 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 GLYATL3Q5SZD4 288 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 TTLL10Q6ZVT0 673 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 NKD1Q969G9 470 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 OR8B4Q96RC9 309 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 DHCR7Q9UBM7 475 aaKnown RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 PRODH2Q9UF12 536 aa11.09□□□□□ -0.63
VPS33B-201ENST00000333371 FARSAQ9Y285 508 aaKnown RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 MRPS18BQ9Y676 258 aaKnown RBP11.09□□□□□ -0.63
VPS33B-201ENST00000333371 XKRYO14609 159 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 CCSO14618 274 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 PPP3CBP16298 524 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF28P17035 718 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 ZP3P21754 424 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 ACHEP22303 614 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 HSD17B7P56937 341 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 ADAM8P78325 824 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
VPS33B-201ENST00000333371 SPOCK1Q08629 439 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 LRRC37A5PQ49AS3 106 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 BEX5Q5H9J7 111 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 WDFY1Q8IWB7 410 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 GABRG1Q8N1C3 465 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 OR4S1Q8NGB4 309 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 SLC38A3Q99624 504 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 NPAS1Q99742 590 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 TRAV14DV4A0A0A6YYC5 116 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 LOC100289279A0A1B0GTE1 492 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 FITM1A5D6W6 292 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms