RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 WFDC8Q8IUA0 241 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 CHCHD4Q8N4Q1 142 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 MMACHCQ9Y4U1 282 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 LOC100289279A0A1B0GTE1 492 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 CTDSP2O14595 271 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 TPPP2P59282 170 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 FIBINQ8TAL6 211 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 PIGQQ9BRB3 760 aa15.12■□□□□ 0.01
PTCH1-201ENST00000331920 CHD2O14647 1828 aaKnown RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SELENOFO60613 162 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 GLCEO94923 617 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 GLIPR1L1Q6UWM5 242 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 TRILQ7L0X0 811 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 CD200R1Q8TD46 325 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 TAAR2Q9P1P5 351 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 FAM166BA8MTA8 275 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 GALR3O60755 368 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 TCN2P20062 427 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 DUSP2Q05923 314 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 DUSP6Q16828 381 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF385BQ569K4 471 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 DGAT2L6Q6ZPD8 337 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SLC39A7Q92504 469 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SLC12A9Q9BXP2 914 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 NPIPB15A6NHN6 443 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 PRSS44E7EML9 344 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 GYPAP02724 150 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 ABCD3P28288 659 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 DCDP81605 110 aaKnown RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 KIR2DS3Q14952 304 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SYPL1Q16563 259 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SFXN4Q6P4A7 337 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SPNS3Q6ZMD2 512 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 GOT1L1Q8NHS2 421 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 IFI44Q8TCB0 444 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 TSLPQ969D9 159 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 L3HYPDHQ96EM0 354 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SPEF2Q9C093 1822 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 A0A1B0GTQ1 180 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 CPMP14384 443 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 RBPJLQ9UBG7 517 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 PITX1P78337 314 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 KLHDC1Q8N7A1 406 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 PAAF1Q9BRP4 392 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 PADI1Q9ULC6 663 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 DNAJC13O75165 2243 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 HSD17B1P14061 328 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SRMP19623 302 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 PPP2CBP62714 309 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF816Q0VGE8 651 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-201ENST00000331920 Q56UQ5 140 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 SLC30A3Q99726 388 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 GON7Q9BXV9 100 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 ACPTQ9BZG2 426 aa15.11■□□□□ 0.01
PTCH1-201ENST00000331920 A0A1W2PPQ1 181 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 ANKRD61A6NGH8 418 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 TMX2-CTNND1H3BSU7 103 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 WDR1O75083 606 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 UTS2O95399 124 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 SLC6A12P48065 614 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 WDR74Q6RFH5 385 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-201ENST00000331920 OR2AE1Q8NHA4 323 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 DPH3Q96FX2 82 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 BLACEA4D250 179 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 SH2D1BO14796 132 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 CXCL12P48061 93 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 RANBP10Q6VN20 620 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 LRRC56Q8IYG6 542 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-201ENST00000331920 UFC1Q9Y3C8 167 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 GLAP06280 429 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 GCSHP23434 173 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 SLC5A2P31639 672 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 RBP2P50120 134 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 ACOT7LQ6ZUV0 252 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 MOB3BQ86TA1 216 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 ARHGEF39Q8N4T4 335 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 FAM157BP0CG42 384 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 ECI1P42126 302 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 FER1L6-AS2Q96M78 137 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 BOLA1Q9Y3E2 137 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 HNRNPA1P09651 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTCH1-201ENST00000331920 PSMB1P20618 241 aaKnown RBP15.1■□□□□ 0.01
PTCH1-201ENST00000331920 GLRA1P23415 457 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 TMEM88Q6PEY1 159 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 OR1L4Q8NGR5 311 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 TMEM18Q96B42 140 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF716A6NP11 495 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 REEP5Q00765 189 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 Q6ZPB1 254 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-201ENST00000331920 FAM122BQ7Z309 247 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 ISCA2Q86U28 154 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 NECTIN4Q96NY8 510 aa15.1■□□□□ 0.01
PTCH1-201ENST00000331920 TRIM23P36406 574 aa15.09■□□□□ 0.01
PTCH1-201ENST00000331920 SULT1A1P50225 295 aa15.09■□□□□ 0.01
PTCH1-201ENST00000331920 OR51S1Q8NGJ8 323 aa15.09■□□□□ 0.01
PTCH1-201ENST00000331920 DEFB127Q9H1M4 99 aa15.09■□□□□ 0.01
PTCH1-201ENST00000331920 NUDT19A8MXV4 375 aa15.09■□□□□ 0.01
PTCH1-201ENST00000331920 GUSBP08236 651 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms