RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SLAMF6Q96DU3 332 aa10.4□□□□□ -0.75
COL4A5-201ENST00000328300 EHFQ9NZC4 300 aa10.4□□□□□ -0.75
COL4A5-201ENST00000328300 MRPL15Q9P015 296 aaKnown RBP10.4□□□□□ -0.75
COL4A5-201ENST00000328300 A0A0A6YYH2 397 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 A6NJ64 397 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 B8ZZF3 427 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 C21orf140B9A014 251 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 HRO43593 1189 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 IL13RA1P78552 427 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 SSBP1Q04837 148 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 AQP6Q13520 282 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 RNPS1Q15287 305 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 Q6ZTK2 550 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ANKRD37Q7Z713 158 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 SIRT6Q8N6T7 355 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 CMTM3Q96MX0 182 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 MED18Q9BUE0 208 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF768Q9H5H4 540 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 C1orf123Q9NWV4 160 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 LOC285556D6RIA3 1793 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 FAM166BA8MTA8 275 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 PPM1DO15297 605 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 SCAF4O95104 1147 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 KNG1P01042 644 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 FXYD4P59646 89 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 DOC2BQ14184 412 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 AGAP6Q5VW22 663 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF547Q8IVP9 402 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 D2HGDHQ8N465 521 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 LINC01555Q8NAE3 123 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 OR56B2PQ8NGI1 322 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 UBL7Q96S82 380 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 DECR2Q9NUI1 292 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 CACFD1Q9UGQ2 172 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 A0A0B4J2E0 115 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 A0A1B0GX12 115 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 G3V3Y1 287 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 MPPED1O15442 326 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 HPP00738 406 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 QDPRP09417 244 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 METAP1P53582 386 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 RBM45Q8IUH3 476 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 WDSUB1Q8N9V3 476 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 TIMD4Q96H15 378 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 TP53TG5Q9Y2B4 290 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 R4GMQ9 66 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 A0A1W2PQ09 198 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ACOD1A6NK06 481 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 PSMB1P20618 241 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 GALP22466 123 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 IKZF1Q13422 519 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 PLK3Q9H4B4 646 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 RBFOX1Q9NWB1 397 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ALG1L2C9J202 215 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 SEC61A1P61619 476 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 FAM83FQ8NEG4 500 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 TSSK2Q96PF2 358 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 SELENOFO60613 162 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 POLR2IP36954 125 aaKnown RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ELP2Q6IA86 826 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 GTPBP8Q8N3Z3 284 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-201ENST00000328300 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 EID2BQ96D98 161 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 OR5B12Q96R08 314 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF226Q9NYT6 803 aa10.39□□□□□ -0.75
COL4A5-201ENST00000328300 MYO18AQ92614 2054 aaKnown RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 SPINT2O43291 252 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 IL9P15248 144 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TBPP20226 339 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 CAMLGP49069 296 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF616Q08AN1 781 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 GK2Q14410 553 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PRICKLE4Q2TBC4 344 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PRAMEF9Q5VWM5 478 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 ACBD4Q8NC06 268 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 OR1M1Q8NGA1 313 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 VN1R1Q9GZP7 353 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 MMP28Q9H239 520 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 RIMS4Q9H426 269 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 HINT3Q9NQE9 182 aaKnown RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TRAPPC2LQ9UL33 140 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PIGLQ9Y2B2 252 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PRAMEF4O60810 478 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 RBP2P50120 134 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TNK1Q13470 666 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PLGLAQ15195 96 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 GUSBP11Q6P575 273 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 YRDCQ86U90 279 aaKnown RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 OR14K1Q8NGZ2 314 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TCTEX1D2Q8WW35 142 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 OR14A2Q96R54 314 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 NECAP2Q9NVZ3 263 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 F8W036 122 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 OR7C1O76099 320 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 HIST1H1CP16403 213 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms