RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PIGMQ9H3S5 423 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 UPB1Q9UBR1 384 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 TNFSF18Q9UNG2 199 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 COLEC10Q9Y6Z7 277 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 ARPC4-TTLL3A0A0A6YYG9 625 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 LINC00587B1AMM8 73 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 HCRTR1O43613 425 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 PI3P19957 117 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 TM4SF4P48230 202 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 LSSP48449 732 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 PRMT2P55345 433 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 PPP1CAP62136 330 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 MARCH3Q86UD3 253 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 FAM3CQ92520 227 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 CCDC3Q9BQI4 270 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 TAS2R4Q9NYW5 299 aa12.94□□□□□ -0.34
CHRNA3-201ENST00000326828 EML5Q05BV3 1969 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 SRPX2O60687 465 aaPredicted RBP12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 APBB3O95704 486 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 TAS2R19P59542 299 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 AIMP2Q13155 320 aaKnown RBP12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 TGIF1Q15583 401 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 CBLN3Q6UW01 205 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 OR5M8Q8NGP6 311 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 NUBPLQ8TB37 319 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 PHOSPHO1Q8TCT1 267 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 RXFP4Q8TDU9 374 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 C15orf40Q8WUR7 153 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 RBM18Q96H35 190 aaKnown RBP12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 BIN3Q9NQY0 253 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 DHCR7Q9UBM7 475 aaKnown RBP12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 SLC27A6Q9Y2P4 619 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 DENND4AQ7Z401 1863 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 ZNF208O43345 1280 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 KIR3DL2P43630 455 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 ABHD13Q7L211 337 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 RTN4RL2Q86UN3 420 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 OR1J4Q8NGS1 313 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 NUDCD2Q8WVJ2 157 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 VSIG4Q9Y279 399 aa12.93□□□□□ -0.34
CHRNA3-201ENST00000326828 OR6A2O95222 327 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 NUDT14O95848 222 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 GPR143P51810 404 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ACTBP60709 375 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ACTG1P63261 375 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 TDGQ13569 410 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ETFBKMTQ8IXQ9 262 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 LOC100289279A0A1B0GTE1 492 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 OIP5O43482 229 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 PNPP00491 289 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ITGB2P05107 769 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 MECP2P51608 486 aaKnown RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 HTRA3P83110 453 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 C2orf27AQ580R0 203 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 NKAPLQ5M9Q1 402 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 EXOSC6Q5RKV6 272 aaKnown RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ACOT7LQ6ZUV0 252 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ZNF584Q8IVC4 421 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ADAD2Q8NCV1 583 aaKnown RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 BHLHE23Q8NDY6 225 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 CYYR1Q96J86 154 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ZNF426Q9BUY5 554 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 FAM117AQ9C073 453 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 B9D1Q9UPM9 204 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 CSAG2Q9Y5P2 127 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 FREM3P0C091 2139 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 KIF26BQ2KJY2 2108 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 EIF1AYO14602 144 aaKnown RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 TSFMP43897 325 aaKnown RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ZNF542PQ5EBM4 170 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 C1QL3Q5VWW1 255 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 PRR22Q8IZ63 422 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 RNF208Q9H0X6 261 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 COA4Q9NYJ1 87 aa12.92□□□□□ -0.34
CHRNA3-201ENST00000326828 URADA6NGE7 173 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 LMX1BO60663 402 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 CTNNB1P35222 781 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 IGFALSP35858 605 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 MPPED2Q15777 294 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 CSNK1A1LQ8N752 337 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 ZNF563Q8TA94 476 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 SFT2D1Q8WV19 159 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 KTI12Q96EK9 354 aaPredicted RBP12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 STACQ99469 402 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 ATXN7L1Q9ULK2 861 aaPredicted RBP12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 DHDHQ9UQ10 334 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 MRPS18BQ9Y676 258 aaKnown RBP12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 CEP290O15078 2479 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 A0A087WUJ7 227 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 TRBV23-1A0A0A0MS06 115 aa12.91□□□□□ -0.34
CHRNA3-201ENST00000326828 OR2F2O95006 317 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms