RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 NANPQ8TBE9 248 aa16.17■□□□□ 0.18
PRKCB-202ENST00000321728 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
PRKCB-202ENST00000321728 AMELYQ99218 206 aa16.17■□□□□ 0.18
PRKCB-202ENST00000321728 TBC1D29Q9UFV1 150 aa16.17■□□□□ 0.18
PRKCB-202ENST00000321728 VSIG4Q9Y279 399 aa16.17■□□□□ 0.18
PRKCB-202ENST00000321728 CARHSP1Q9Y2V2 147 aaKnown RBP16.17■□□□□ 0.18
PRKCB-202ENST00000321728 HEBP2Q9Y5Z4 205 aa16.17■□□□□ 0.18
PRKCB-202ENST00000321728 A0A1W2PP55 124 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 ZNF705EA8MWA4 302 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 CYR61O00622 381 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 FGF16O43320 207 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 EIF3GO75821 320 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 IFNA4P05014 189 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 VAMP1P23763 118 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 SDHAP31040 664 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 PNLIPRP2P54317 469 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 IL13RA1P78552 427 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 DMWDQ09019 674 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 GLYATL3Q5SZD4 288 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 C3orf49Q96BT1 292 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 CPNE2Q96FN4 548 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 MOGAT1Q96PD6 335 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 GPX7Q96SL4 187 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 SLC22A11Q9NSA0 550 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 TPT1P13693 172 aaKnown RBP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 NR0B1P51843 470 aaKnown RBP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 CXADRP78310 365 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 AIMP2Q13155 320 aaKnown RBP16.16■□□□□ 0.18
PRKCB-202ENST00000321728 IGSF11Q5DX21 431 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 RD3Q7Z3Z2 195 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 LYG2Q86SG7 212 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 TMED6Q8WW62 240 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 PPP1R14AQ96A00 147 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 CTHRC1Q96CG8 243 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 PIK3IP1Q96FE7 263 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 PHB2Q99623 299 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 EDEM2Q9BV94 578 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 CST11Q9H112 138 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 EPHA6Q9UF33 1036 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 SLC22A13Q9Y226 551 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 SLC17A4Q9Y2C5 497 aa16.16■□□□□ 0.18
PRKCB-202ENST00000321728 C13orf42A0A1B0GVH6 325 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 FARS2O95363 451 aaKnown RBP16.15■□□□□ 0.18
PRKCB-202ENST00000321728 HTR2CP28335 458 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-202ENST00000321728 EGR3Q06889 387 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 ELOCQ15369 112 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 CDNFQ49AH0 187 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 LURAP1LQ8IV03 231 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 ZNF584Q8IVC4 421 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 RERGQ96A58 199 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-202ENST00000321728 FOXRED1Q96CU9 486 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-202ENST00000321728 SLC41A2Q96JW4 573 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 INTS14Q96SY0 518 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 ELOVL3Q9HB03 270 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 LRIT1Q9P2V4 623 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 CGGBP1Q9UFW8 167 aaPredicted RBP16.15■□□□□ 0.18
PRKCB-202ENST00000321728 KCNG2Q9UJ96 466 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 PILRAQ9UKJ1 303 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 NUP210LQ5VU65 1888 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 IGKV1D-42A0A075B6H8 117 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 A0A0B4J2A0 478 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 CPED1A4D0V7 1026 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 FITM1A5D6W6 292 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 C5orf51A6NDU8 294 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 TMEM235A6NFC5 223 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 EFCAB7A8K855 629 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 ZBTB25P24278 435 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 DEFB115Q30KQ5 88 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 NKAPLQ5M9Q1 402 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 C10orf91Q5T1B1 145 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 OR10K2Q6IF99 312 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 PAPD4Q6PIY7 484 aaKnown RBP16.15■□□□□ 0.18
PRKCB-202ENST00000321728 SLC35D2Q76EJ3 337 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 LINC00469Q8N7U9 141 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 GATSQ8NAP1 163 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 OR4K17Q8NGC6 315 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 RNF141Q8WVD5 230 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 DCUN1D4Q92564 292 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 SLC22A18Q96BI1 424 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 FOXN4Q96NZ1 517 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 SELENOIQ9C0D9 397 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 SHPKQ9UHJ6 478 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 KLK13Q9UKR3 277 aa16.15■□□□□ 0.18
PRKCB-202ENST00000321728 MEX3AA1L020 520 aaKnown RBP16.14■□□□□ 0.17
PRKCB-202ENST00000321728 PRR19A6NJB7 356 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 LINC00587B1AMM8 73 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 SGCEO43556 437 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 HLA-DQA2P01906 255 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 CENPAP49450 140 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 CCR4P51679 360 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 ADPRHP54922 357 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 PMPCAQ10713 525 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 SRSF5Q13243 272 aaKnown RBP16.14■□□□□ 0.17
PRKCB-202ENST00000321728 FCRL6Q6DN72 434 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 FIGLAQ6QHK4 219 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 RCBTB1Q8NDN9 531 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 OR4A4PQ8NGN8 299 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 OR10R2Q8NGX6 335 aa16.14■□□□□ 0.17
PRKCB-202ENST00000321728 OR4C3Q8NH37 302 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms