RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 BDKRB2P30411 391 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 MEOX2P50222 304 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PPIAP62937 165 aaKnown RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 BTG2P78543 158 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 SRSF3P84103 164 aaKnown RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 SSBP1Q04837 148 aaKnown RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 TMEM196Q5HYL7 178 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 EEF1A1P5Q5VTE0 462 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 FAM166AQ6J272 317 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 ELF4Q99607 663 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 KLHDC3Q9BQ90 382 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 ZNF471Q9BX82 626 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 SLC22A13Q9Y226 551 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 KNL1Q8NG31 2342 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 FANCMQ8IYD8 2048 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 A0A0D9SG52 128 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 CCSO14618 274 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 AGTR1P30556 359 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 TAS2R19P59542 299 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ACTBP60709 375 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ACTG1P63261 375 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 TMEM205Q6UW68 189 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 SLC35D2Q76EJ3 337 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 RAB11FIP2Q7L804 512 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ZNF761Q86XN6 746 aaPredicted RBP12.13□□□□□ -0.47
SKA3-202ENST00000314759 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 OR1J2Q8NGS2 313 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
SKA3-202ENST00000314759 SFXN1Q9H9B4 322 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ELOVL3Q9HB03 270 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ZNF304Q9HCX3 659 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 UPB1Q9UBR1 384 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 EPHA6Q9UF33 1036 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 CLDN16Q9Y5I7 305 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 TMEM14AQ9Y6G1 99 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 A0A1B0GTI1 187 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 A0A1B0GW55 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ALOX12BO75342 701 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 APBB3O95704 486 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 PNPP00491 289 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4L2P0CJ85 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4L3P0CJ86 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4L4P0CJ87 422 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4L5P0CJ88 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4L6P0CJ89 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4L7P0CJ90 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
SKA3-202ENST00000314759 MEP1BQ16820 701 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ATPAF1Q5TC12 328 aaPredicted RBP12.13□□□□□ -0.47
SKA3-202ENST00000314759 TMEM184AQ6ZMB5 413 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 YAF2Q8IY57 180 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 KCNRGQ8N5I3 272 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 OTOSQ8NHW6 89 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ELSPBP1Q96BH3 223 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 FOXN4Q96NZ1 517 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 SLC25A21Q9BQT8 299 aaPredicted RBP12.13□□□□□ -0.47
SKA3-202ENST00000314759 POTEKPQ9BYX7 375 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 OR10A5Q9H207 317 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 ASF1BQ9NVP2 202 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 DUX4Q9UBX2 424 aa12.13□□□□□ -0.47
SKA3-202ENST00000314759 AMY2AP04746 511 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 SPP1P10451 314 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 MYOGP15173 224 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 DHRS2Q13268 280 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 TAF13Q15543 124 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 ALG11Q2TAA5 492 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 EMC4Q5J8M3 183 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 ZNF627Q7L945 461 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 TMEM229BQ8NBD8 167 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 PHOSPHO1Q8TCT1 267 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 PTDSS2Q9BVG9 487 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 KANTRA0A1W2PQU2 76 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 OR6C76A6NM76 312 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 RENP00797 406 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 ZNF735P0CB33 412 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 LIPCP11150 499 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 COL9A1P20849 921 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 SCRN3Q0VDG4 424 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 SKP2Q13309 424 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.12□□□□□ -0.47
SKA3-202ENST00000314759 FNDC7Q5VTL7 733 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 GLT8D1Q68CQ7 371 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 MED25Q71SY5 747 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 NDUFAF7Q7L592 441 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 ZSCAN1Q8NBB4 408 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 CCNL2Q96S94 520 aaPredicted RBP12.12□□□□□ -0.47
SKA3-202ENST00000314759 KXD1Q9BQD3 176 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 ZMAT3Q9HA38 289 aaKnown RBP12.12□□□□□ -0.47
SKA3-202ENST00000314759 GPN3Q9UHW5 284 aaPredicted RBP12.12□□□□□ -0.47
SKA3-202ENST00000314759 TNFSF18Q9UNG2 199 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 GTF2A1LQ9UNN4 478 aa12.12□□□□□ -0.47
SKA3-202ENST00000314759 RNF222A6NCQ9 220 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms