RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 OR14I1A6ND48 311 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 NSA2O95478 260 aaKnown RBP12.5□□□□□ -0.41
MKS1-201ENST00000313863 PRKACAP17612 351 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 CNR1P21554 472 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 PBX2P40425 430 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 RIDAP52758 137 aaKnown RBP12.5□□□□□ -0.41
MKS1-201ENST00000313863 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
MKS1-201ENST00000313863 MEP1BQ16820 701 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 C11orf87Q6NUJ2 197 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 LRFN4Q6PJG9 635 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 ACOT7LQ6ZUV0 252 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 MAMDC2Q7Z304 686 aaPredicted RBP12.5□□□□□ -0.41
MKS1-201ENST00000313863 METTL21AQ8WXB1 218 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 PMEPA1Q969W9 287 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
MKS1-201ENST00000313863 LRRC46Q96FV0 321 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 GTF2A1LQ9UNN4 478 aa12.5□□□□□ -0.41
MKS1-201ENST00000313863 NOP16Q9Y3C1 178 aaKnown RBP12.5□□□□□ -0.41
MKS1-201ENST00000313863 TRAV36DV7A0A075B6V5 113 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 UTS2O95399 124 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 KLF8O95600 359 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 MT-ATP6P00846 226 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 CD37P11049 281 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 HLA-GP17693 338 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 COL9A1P20849 921 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 CXCR1P25024 350 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 TACR3P29371 465 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 B2MP61769 119 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 MC2RQ01718 297 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 CD226Q15762 336 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 ATPAF1Q5TC12 328 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 RAB12Q6IQ22 244 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 ZNF584Q8IVC4 421 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 BPIFB2Q8N4F0 458 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 TAAR8Q969N4 342 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 ZBTB8AQ96BR9 441 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 FOXRED1Q96CU9 486 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 DMRTA2Q96SC8 542 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 ADAM19Q9H013 955 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 FAM60AQ9NP50 221 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 B9D1Q9UPM9 204 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 HS3ST3A1Q9Y663 406 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 RAB19A4D1S5 217 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 EIF1AYO14602 144 aaKnown RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 DOK2O60496 412 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 MPZP25189 248 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 PPICP45877 212 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 EIF1AXP47813 144 aaKnown RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 DEFA5Q01523 94 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 DHRS2Q13268 280 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 DEFB110Q30KQ9 67 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 PHF19Q5T6S3 580 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 JMJD6Q6NYC1 403 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 LRRC69Q6ZNQ3 347 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 NDUFAF7Q7L592 441 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 LINC00518Q8N0U6 118 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 RELL2Q8NC24 303 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 SLC37A2Q8TED4 501 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 PATE1Q8WXA2 126 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 BADQ92934 168 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 LMF1Q96S06 567 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 VRK1Q99986 396 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
MKS1-201ENST00000313863 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
MKS1-201ENST00000313863 A0A1W2PPC1 479 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 PRSS37A4D1T9 235 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 METTL21EPA6NDL7 271 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 OIP5O43482 229 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 SLC25A12O75746 678 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 BGLAPP02818 100 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
MKS1-201ENST00000313863 RAB6AP20340 208 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 DLSTP36957 453 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 RABIFP47224 123 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 DNASE1L1P49184 302 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 RPL27P61353 136 aaKnown RBP12.48□□□□□ -0.41
MKS1-201ENST00000313863 BTG2P78543 158 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 MELKQ14680 651 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 GLYATL3Q5SZD4 288 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 FAHD2BQ6P2I3 314 aaPredicted RBP12.48□□□□□ -0.41
MKS1-201ENST00000313863 Q6ZSR6 202 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 BIVMQ86UB2 503 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 CATSPERDQ86XM0 798 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 ZDHHC22Q8N966 263 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 PLPP7Q8NBV4 271 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 OR1J2Q8NGS2 313 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 FAHD2AQ96GK7 314 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 SLC46A1Q96NT5 459 aa12.48□□□□□ -0.41
MKS1-201ENST00000313863 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
MKS1-201ENST00000313863 PRMT8Q9NR22 394 aaPredicted RBP12.48□□□□□ -0.41
MKS1-201ENST00000313863 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms