RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 BCL2L11O43521 198 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 PRSS23O95084 383 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 HLA-HP01893 362 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 MT-ND4LP03901 98 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 ACSM4P0C7M7 580 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 GJA4P35212 333 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 HTR5AP47898 357 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 P2RX1P51575 399 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CLDN17P56750 224 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CATR1Q13166 79 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CLPPQ16740 277 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 GLDNQ6ZMI3 551 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CLEC1AQ8NC01 280 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 MSI2Q96DH6 328 aaKnown RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 UHRF2Q96PU4 802 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 MMACHCQ9Y4U1 282 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 ACTL6BO94805 426 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CD3DP04234 171 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 OTX2P32243 289 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 RAG2P55895 527 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SLC35A1P78382 337 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 DPTQ07507 201 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 CD300CQ08708 224 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SLC25A35Q3KQZ1 300 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM176BQ3YBM2 270 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 C1orf140Q5VVS0 124 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 PTDSS2Q9BVG9 487 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 STRAPQ9Y3F4 350 aaKnown RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 ST8SIA3O43173 380 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 FCMRO60667 390 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 APEHP13798 732 aaKnown RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 TBPP20226 339 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 AADACP22760 399 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 DCTDP32321 178 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 RAB1AP62820 205 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 GRB2P62993 217 aaKnown RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 RNLSQ5VYX0 342 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SHEQ5VZ18 495 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 NAXDQ8IW45 347 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 OR51A4Q8NGJ6 313 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 FAM3CQ92520 227 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 TGIF2Q9GZN2 237 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SEMA6CQ9H3T2 930 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 COA3Q9Y2R0 106 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 LOC107986453A0A1B0GWG9 222 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 EIF4E2O60573 245 aaKnown RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 PEX11BO96011 259 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 RAB4AP20338 218 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 BCKDHBP21953 392 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 IGFBP6P24592 240 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 ZCCHC4Q9H5U6 513 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SPACA1Q9HBV2 294 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 RGS13O14921 159 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 HPNP05981 417 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SSX1Q16384 188 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 RNF212Q495C1 297 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 PYCR3Q53H96 274 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 GRAMD2AQ8IUY3 354 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM217Q8N7C4 229 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 GCDHQ92947 438 aaPredicted RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 GNG13Q9P2W3 67 aa11.76□□□□□ -0.53
COL3A1-201ENST00000304636 MCTS1Q9ULC4 181 aaKnown RBP11.76□□□□□ -0.53
COL3A1-201ENST00000304636 ARAP2Q8WZ64 1704 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 KIAA1551Q9HCM1 1747 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 MEIKINA0A087WXM9 373 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 POU3F2P20265 443 aaPredicted RBP11.75□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF561Q8N587 486 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 FAM71CQ8NEG0 241 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 HSD17B8Q92506 261 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 PRELID3BQ9Y3B1 194 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 K7ESM1 405 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 KITLGP21583 273 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 DUSP1P28562 367 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 IL2RGP31785 369 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
COL3A1-201ENST00000304636 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
COL3A1-201ENST00000304636 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 H2AFB1P0C5Y9 115 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 FOXK1P85037 733 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 LINC00303Q3SY05 128 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 LYG2Q86SG7 212 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 NAA40Q86UY6 237 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 TEX19Q8NA77 164 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 SFT2D1Q8WV19 159 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 A4GNTQ9UNA3 340 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 MDFIC2A0A1B0GVS7 189 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM235A6NFC5 223 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 OR6C76A6NM76 312 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 DSCR3O14972 297 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 XRCC3O43542 346 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 ADIRFQ15847 76 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 FAM78AQ5JUQ0 283 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF705AQ6ZN79 300 aaPredicted RBP11.75□□□□□ -0.53
COL3A1-201ENST00000304636 Q6ZRG5 221 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms