RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GIMAP1Q8WWP7 306 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 GMDSO60547 372 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 EIF1BO60739 113 aaKnown RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 TCTN1Q2MV58 587 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 PRAMEF5Q5TYX0 476 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 PRAMEF6Q5VXH4 476 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ZFP62Q8NB50 900 aaPredicted RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 RPL3LQ92901 407 aaKnown RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 SDR39U1Q9NRG7 319 aaPredicted RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ACOXLQ9NUZ1 547 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MMACHCQ9Y4U1 282 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MSTNO14793 375 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 GCAP28676 217 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 HTR2BP41595 481 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 RAB13P51153 203 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 PMP22Q01453 160 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MOGQ16653 247 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 RBMXL1Q96E39 390 aaKnown RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 KNDC1Q76NI1 1749 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF195O14628 629 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 KCNAB3O43448 404 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MED6O75586 246 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF728P0DKX0 622 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF92Q03936 586 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 FGFBP1Q14512 234 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 NPEPL1Q8NDH3 523 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 NUDT9Q9BW91 350 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 B3GAT1Q9P2W7 334 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 NOTOA8MTQ0 251 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 A8MVM7 634 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF45Q02386 682 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 CATR1Q13166 79 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 BCL7AQ4VC05 210 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 PLXDC2Q6UX71 529 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 LSMEM2Q8N112 164 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 OR10G3Q8NGC4 313 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM106AQ96A25 262 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 GHRLQ9UBU3 117 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 LAP3P28838 519 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 OPRL1P41146 370 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 GPM6AP51674 278 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 IHHQ14623 411 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 FAAP20Q6NZ36 180 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 GALNT16Q8N428 558 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 OR52I1Q8NGK6 324 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 CT55Q8WUE5 264 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ABHD6Q9BV23 337 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 CHRNA9Q9UGM1 479 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 PURGQ9UJV8 347 aaKnown RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MEGF11A6BM72 1044 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ALKBH1Q13686 389 aaKnown RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ELAVL1Q15717 326 aaKnown RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 MPPED2Q15777 294 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 NAA50Q9GZZ1 169 aaKnown RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 C5P01031 1676 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 A0A0B4J203 849 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 FAM189A1O60320 539 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 RPL27P61353 136 aaKnown RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 GPR176Q14439 515 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 AMER3Q8N944 861 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 LGALS14Q8TCE9 139 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM230Q96A57 120 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ANKRD19PQ9H560 264 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 TAS2R8Q9NYW2 309 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 PYCARD-AS1I3L0S3 204 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 CDK1P06493 297 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 HIST1H1CP16403 213 aaKnown RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 MPEG1Q2M385 716 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF529Q6P280 563 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 Q6ZSR9 355 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SLAMF6Q96DU3 332 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 RIMS4Q9H426 269 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 A8MXE2 369 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 WDR1O75083 606 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SLCO2B1O94956 709 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ACP2P11117 423 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 ALDH3B2P48448 385 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 TSPAN31Q12999 210 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 DESI1Q6ICB0 168 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 NLRC3Q7RTR2 1065 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM99Q8N816 258 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 GJC3Q8NFK1 279 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SDF2Q99470 211 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 RNF167Q9H6Y7 350 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 LIN7BQ9HAP6 207 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 COPS3Q9UNS2 423 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 TRAF3IP2O43734 574 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 DNAJB5O75953 348 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 HOXB3P14651 431 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 CPEP16870 476 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 IL3RAP26951 378 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 S100A12P80511 92 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 H2BFWTQ7Z2G1 175 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 EAF1Q96JC9 268 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SLC22A13Q9Y226 551 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 CSF3P09919 207 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 FPR3P25089 353 aa7.1□□□□□ -1.27
SCN9A-201ENST00000303354 SMIM15Q7Z3B0 74 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms