RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 A0A096LPE4 126 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 A0A1W2PPZ6 126 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 BLACEA4D250 179 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 PIGAP37287 484 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 AMIGO3Q86WK7 504 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 FAM189A1O60320 539 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 AIFM1O95831 613 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 EPHA2P29317 976 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-201ENST00000303296 IRS1P35568 1242 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 GDNFP39905 211 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 ENDOGQ14249 297 aaKnown RBP13.12□□□□□ -0.31
HIPK3-201ENST00000303296 ANGPTL5Q86XS5 388 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 PARP16Q8N5Y8 322 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 TMEM163Q8TC26 289 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 CPPED1Q9BRF8 314 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-201ENST00000303296 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 C5orf49A4QMS7 147 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 MMP7P09237 267 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-201ENST00000303296 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
HIPK3-201ENST00000303296 AKR1C3P42330 323 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 NAT6Q93015 286 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 DIP2AQ14689 1571 aa13.12□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF133P52736 654 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 PDZK1IP1Q13113 114 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 FDX2Q6P4F2 183 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 PRSS45Q7RTY3 260 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SLC22A24Q8N4F4 322 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 MARC2Q969Z3 335 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 CSAG2Q9Y5P2 127 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 MYADML2A6NDP7 307 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 H3BNC9 293 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 CSNK1G2P78368 415 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 OR13C8Q8NGS7 320 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SARGQ9BW04 601 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 HINT3Q9NQE9 182 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 ZDHHC18Q9NUE0 388 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF623O75123 536 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 OR10P1Q8NGE3 313 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 OR1N1Q8NGS0 311 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 RALYQ9UKM9 306 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SELEP16581 610 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 TRIM23P36406 574 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 CSNK1EP49674 416 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 ZNF140P52738 457 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 RAB40BQ12829 278 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SFTPA1Q8IWL2 248 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 KCNG3Q8TAE7 436 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 DPH3P1Q9H4G8 78 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 WASHC3Q9Y3C0 194 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 U3KQ87 197 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 FAM221AA4D161 298 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 PLRG1O43660 514 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 NME1P15531 152 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SDC1P18827 310 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 RPL24P83731 157 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 C17orf67Q0P5P2 114 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 DCXRQ7Z4W1 244 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 MRPL10Q7Z7H8 261 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 RPL3LQ92901 407 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 TMIGD2Q96BF3 282 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 PLPPR2Q96GM1 343 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 ADRA2CP18825 462 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 PAX5Q02548 391 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 KIR2DS3Q14952 304 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 STUMQ69YW2 141 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 BTNL3Q6UXE8 466 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
HIPK3-201ENST00000303296 DHCR7Q9UBM7 475 aaKnown RBP13.11□□□□□ -0.31
HIPK3-201ENST00000303296 NAGAP17050 411 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 PCSK6P29122 969 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 GNG10P50151 68 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 KLHDC1Q8N7A1 406 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 TMEM106AQ96A25 262 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 AGLP35573 1532 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 UTS2O95399 124 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 CEBPBP17676 345 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 BMP5P22003 454 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 C21orf33P30042 268 aaPredicted RBP13.1□□□□□ -0.31
HIPK3-201ENST00000303296 TNFSF8P32971 234 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 KIAA1024LP59773 190 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 TEKQ02763 1124 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
HIPK3-201ENST00000303296 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms