RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IGHA1P01876 353 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 CD1CP29017 333 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 S100A11P31949 105 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 CLRN1P58418 232 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 PSG6Q00889 435 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 CAMK2DQ13557 499 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ZNF273Q14593 569 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ETFDHQ16134 617 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 GAB4Q2WGN9 574 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 FCRL6Q6DN72 434 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 OR4K17Q8NGC6 315 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 PAQR8Q8TEZ7 354 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ZBTB8AQ96BR9 441 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 CST11Q9H112 138 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 S1PR5Q9H228 398 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 TAS2R8Q9NYW2 309 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 TAS2R4Q9NYW5 299 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 PLRG1O43660 514 aaKnown RBP12.76□□□□□ -0.37
SDC2-201ENST00000302190 TPOP07202 933 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 TUSC1Q2TAM9 212 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 PRICKLE4Q2TBC4 344 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 EEF1A1P5Q5VTE0 462 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 C3orf33Q6P1S2 294 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 DNM1P34Q6PK57 102 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 OR10K1Q8NGX5 313 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ZDHHC12Q96GR4 267 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ELF5Q9UKW6 265 aaPredicted RBP12.76□□□□□ -0.37
SDC2-201ENST00000302190 HHLA2Q9UM44 414 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 NDUFA2O43678 99 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 SUSD5O60279 629 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 S100A6P06703 90 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 CSF1P09603 554 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ACHEP22303 614 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 ACKR1Q16570 336 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 HAGHLQ6PII5 290 aaPredicted RBP12.76□□□□□ -0.37
SDC2-201ENST00000302190 DCUN1D4Q92564 292 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 FGGYQ96C11 551 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 LPAR4Q99677 370 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 IER2Q9BTL4 223 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
SDC2-201ENST00000302190 C2orf42Q9NWW7 574 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 OR5V1Q9UGF6 321 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 A0A087WV48 116 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 ICOSLGO75144 302 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 HEXBP07686 556 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 HOXB5P09067 269 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 SMCO1Q147U7 214 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 CLLU1Q5K131 121 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 BATF2Q8N1L9 274 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 NUDCD2Q8WVJ2 157 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 WDR89Q96FK6 387 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 ZNF587Q96SQ5 575 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 PARP12Q9H0J9 701 aaKnown RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 LYRM4Q9HD34 91 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 DNAJB12Q9NXW2 375 aaKnown RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 CRTAPO75718 401 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 APOC1P02654 83 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 HTR2CP28335 458 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 ZNF41P51814 821 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 RIN1Q13671 783 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 C2orf76Q3KRA6 126 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 PRAMEF20Q5VT98 475 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 ADGRG3Q86Y34 549 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 ATOH1Q92858 354 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 POFUT1Q9H488 388 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 CUTCQ9NTM9 273 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 SULT1B1O43704 296 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 FADS1O60427 444 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 MPZL1O95297 269 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 GLAP06280 429 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 ACSM4P0C7M7 580 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 RBM34P42696 430 aaKnown RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 MMP15P51511 669 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 RASGEF1BQ0VAM2 473 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 LGALSLQ3ZCW2 172 aaPredicted RBP12.75□□□□□ -0.37
SDC2-201ENST00000302190 DCXRQ7Z4W1 244 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 OR5B2Q96R09 309 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 RHBDD3Q9Y3P4 386 aa12.75□□□□□ -0.37
SDC2-201ENST00000302190 KRBOX1C9JBD0 128 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 LINC01387J3KSC0 135 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 YKT6O15498 198 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 AKR7A3O95154 331 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 RRASP10301 218 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 AMY2BP19961 511 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 SERTAD2Q14140 314 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 CD226Q15762 336 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 DMKNQ6E0U4 476 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms