RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ITGB2P05107 769 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 MECP2P51608 486 aaKnown RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 PNLIPRP2P54317 469 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 SLC9A3R2Q15599 337 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 INPP5JQ15735 1006 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 USP53Q70EK8 1073 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 SLC29A4Q7RTT9 530 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 PRSS35Q8N3Z0 413 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 METTL27Q8N6F8 245 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 MRI1Q9BV20 369 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 ZBP1Q9H171 429 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 DHDHQ9UQ10 334 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 A0A1B0GV50 99 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 TTLL8A6PVC2 850 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 GPR75O95800 540 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 IFNA6P05013 189 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 SERPINA5P05154 406 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 ACTR1BP42025 376 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 GPR143P51810 404 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 ACTR1AP61163 376 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 RPS15AP62244 130 aaKnown RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 GGTLC2Q14390 218 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 LILRA6Q6PI73 481 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 MARCH3Q86UD3 253 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 FAM174AQ8TBP5 190 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 RSPRY1Q96DX4 576 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 DEFB118Q96PH6 123 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 CCDC3Q9BQI4 270 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 RSRP1Q9BUV0 290 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 MFRPQ9BY79 579 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 CHMP1AQ9HD42 196 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-201ENST00000300527 SLC22A7Q9Y694 548 aa13.27□□□□□ -0.28
COL6A2-201ENST00000300527 F5P12259 2224 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 ICOSLGO75144 302 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 FBXO24O75426 580 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 RPS4Y1P22090 263 aaKnown RBP13.27□□□□□ -0.29
COL6A2-201ENST00000300527 SERPINF1P36955 418 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 DNASE1L1P49184 302 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 S100A10P60903 97 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 RAB5BP61020 215 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL6A2-201ENST00000300527 ELAVL1Q15717 326 aaKnown RBP13.27□□□□□ -0.29
COL6A2-201ENST00000300527 GFOD2Q3B7J2 385 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF425Q6IV72 752 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 ADAD2Q8NCV1 583 aaKnown RBP13.27□□□□□ -0.29
COL6A2-201ENST00000300527 OR4K17Q8NGC6 315 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 PHOSPHO1Q8TCT1 267 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 WFIKKN2Q8TEU8 576 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 SLC41A2Q96JW4 573 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.27□□□□□ -0.29
COL6A2-201ENST00000300527 CKLFQ9UBR5 152 aa13.27□□□□□ -0.29
COL6A2-201ENST00000300527 CXorf51AA0A1B0GTR3 108 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 EIF1AYO14602 144 aaKnown RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 NUDT14O95848 222 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ERCC1P07992 297 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 TPT1P13693 172 aaKnown RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ID4P47928 161 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 CEBPEQ15744 281 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 SMAD2Q15796 467 aaKnown RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 PAPD4Q6PIY7 484 aaKnown RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 TMPRSS9Q7Z410 1059 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 NAA40Q86UY6 237 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ETFBKMTQ8IXQ9 262 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 CSNK1A1LQ8N752 337 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 CAMKVQ8NCB2 501 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 PHB2Q99623 299 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 SEMA6CQ9H3T2 930 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 FGF22Q9HCT0 170 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 RPS10P5Q9NQ39 176 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 NUP210Q8TEM1 1887 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 H0YGG7 62 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 DAOP14920 347 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 CD80P33681 288 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 RBM34P42696 430 aaKnown RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 KIR3DL2P43630 455 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 SEC13P55735 322 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ARF3P61204 181 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 BIKQ13323 160 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 GPR18Q14330 331 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 FIGLAQ6QHK4 219 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 GPX8Q8TED1 209 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 TSACCQ96A04 125 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 RNF166Q96A37 237 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ISOC2Q96AB3 205 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 SLC25A44Q96H78 314 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-201ENST00000300527 SLC27A6Q9Y2P4 619 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 COLEC10Q9Y6Z7 277 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 LRRK1Q38SD2 2015 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 MPDZO75970 2070 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 CEACAM5P06731 702 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 HTR2CP28335 458 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 SDHAP31040 664 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF550Q7Z398 422 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 TRAPPC6BQ86SZ2 158 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 OR5AP2Q8NGF4 316 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 OR13C8Q8NGS7 320 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF563Q8TA94 476 aa13.26□□□□□ -0.29
COL6A2-201ENST00000300527 RBM18Q96H35 190 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms