RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 KCNJ13O60928 360 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 ZNF254O75437 659 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 TBX6O95947 436 aaPredicted RBP12.09□□□□□ -0.47
CASC4-201ENST00000299957 SERTAD2Q14140 314 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 KIR2DS5Q14953 304 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 TIGD3Q6B0B8 471 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 P4HA3Q7Z4N8 544 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 ANGPTL5Q86XS5 388 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 ZNF440Q8IYI8 595 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 OR2AK2Q8NG84 335 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 ISYNA1Q9NPH2 558 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 CA10Q9NS85 328 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 A0A0B4J2E0 115 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 A0A1B0GX12 115 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
CASC4-201ENST00000299957 TMEM212A6NML5 194 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 BHLHE40O14503 412 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 TPOP07202 933 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 PPT1P50897 306 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 PMPCAQ10713 525 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 TOMM34Q15785 309 aaPredicted RBP12.09□□□□□ -0.47
CASC4-201ENST00000299957 SLC16A9Q7RTY1 509 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 LRRTM1Q86UE6 522 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 SLC22A8Q8TCC7 542 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 FOXRED1Q96CU9 486 aaPredicted RBP12.09□□□□□ -0.47
CASC4-201ENST00000299957 HAVCR1Q96D42 359 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 ZNF681Q96N22 645 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 SIGLEC11Q96RL6 698 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 APMAPQ9HDC9 416 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 SLC17A4Q9Y2C5 497 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 TRAV8-7A0A075B6U6 113 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 WDPCPO95876 746 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 SPINK2P20155 84 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 MUC20Q8N307 709 aaPredicted RBP12.09□□□□□ -0.47
CASC4-201ENST00000299957 MFSD8Q8NHS3 518 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 EHFQ9NZC4 300 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 NTMQ9P121 344 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 DSPPQ9NZW4 1301 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 LILRB3O75022 631 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 SRYQ05066 204 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 SHHQ15465 462 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 NR2C2APQ86WQ0 139 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 OR4D10Q8NGI6 311 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 ELP5Q8TE02 316 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 PIGTQ969N2 578 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 KLHL13Q9P2N7 655 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 SUSD2Q9UGT4 822 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
CASC4-201ENST00000299957 IGHV3-64DA0A0J9YX35 117 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 LOC107986453A0A1B0GWG9 222 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 STK17BO94768 372 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 SNRNP70P08621 437 aaKnown RBP12.08□□□□□ -0.48
CASC4-201ENST00000299957 GNB3P16520 340 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 ZNF14P17017 642 aaPredicted RBP12.08□□□□□ -0.48
CASC4-201ENST00000299957 MMP15P51511 669 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 CAV2P51636 162 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 CD226Q15762 336 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 TMEM81Q6P7N7 255 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 TMPRSS11FQ6ZWK6 438 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 PRR18Q8N4B5 295 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 OR1J2Q8NGS2 313 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 MR1Q95460 341 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 LINC00052Q96N35 136 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 DHRS9Q9BPW9 319 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
CASC4-201ENST00000299957 CRB3Q9BUF7 120 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 ZNF304Q9HCX3 659 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 DOCK9Q9BZ29 2069 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 NANOS3P60323 173 aaKnown RBP12.08□□□□□ -0.48
CASC4-201ENST00000299957 CD300LDQ6UXZ3 194 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 OVCH1Q7RTY7 1134 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 GVQW1Q8N7I0 195 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 ZNF321PQ8N8H1 164 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 OR4K15Q8NH41 348 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 SLAMF9Q96A28 289 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 LCORQ96JN0 433 aaPredicted RBP12.08□□□□□ -0.48
CASC4-201ENST00000299957 STACQ99469 402 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 RPS10P5Q9NQ39 176 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 KCNE5Q9UJ90 142 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 MEMO1Q9Y316 297 aa12.08□□□□□ -0.48
CASC4-201ENST00000299957 ZNF205O95201 554 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 CBX7O95931 251 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 EFNB2P52799 333 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 PSG6Q00889 435 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 BMFQ96LC9 184 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 SLC2A4RGQ9NR83 387 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 FGF21Q9NSA1 209 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 DNAJB12Q9NXW2 375 aaKnown RBP12.07□□□□□ -0.48
CASC4-201ENST00000299957 MYLKQ15746 1914 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 GGT3PA6NGU5 568 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms