RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 MDGA2Q7Z553 956 aa12.25□□□□□ -0.45
CDH8-201ENST00000299345 PRSS42Q7Z5A4 293 aa12.25□□□□□ -0.45
CDH8-201ENST00000299345 OR52N5Q8NH56 324 aa12.25□□□□□ -0.45
CDH8-201ENST00000299345 ST8SIA1Q92185 356 aa12.25□□□□□ -0.45
CDH8-201ENST00000299345 MYEF2Q9P2K5 600 aaKnown RBP12.25□□□□□ -0.45
CDH8-201ENST00000299345 TRBV5-7A0A0A0MS05 114 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 LOC100289279A0A1B0GTE1 492 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 CRB3Q9BUF7 120 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 B3GNT4Q9C0J1 378 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 SEC61A2Q9H9S3 476 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 DLL4Q9NR61 685 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 LRP12Q9Y561 859 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 MEGF11A6BM72 1044 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 TGM6O95932 706 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 OPN1LWP04000 364 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 ALDOBP05062 364 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 HLA-DOBP13765 273 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 SPOCK1Q08629 439 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 TAF13Q15543 124 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 HYAL4Q2M3T9 481 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 TMEM255AQ5JRV8 349 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 GLYATL3Q5SZD4 288 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 RHBDD2Q6NTF9 364 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 WDR74Q6RFH5 385 aaPredicted RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 TMEM185BQ9H7F4 350 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 MRPL22Q9NWU5 206 aaKnown RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 MED29Q9NX70 200 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 TAS2R4Q9NYW5 299 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 THADAQ6YHU6 1953 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 SLC17A2O00624 439 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 GIMD1P0DJR0 217 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 APOBEC1P41238 236 aaKnown RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 EFNA3P52797 238 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 FMODQ06828 376 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 TMEM71Q6P5X7 295 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 ANKRD16Q6P6B7 361 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 ZNF704Q6ZNC4 412 aaPredicted RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 Q6ZTK2 550 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 RABEPKQ7Z6M1 372 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 GPAT4Q86UL3 456 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 ZNF519Q8TB69 540 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 EXO5Q9H790 373 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 ZFP64Q9NPA5 681 aa12.24□□□□□ -0.45
CDH8-201ENST00000299345 ZNF275Q9NSD4 429 aaPredicted RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 PPIEQ9UNP9 301 aaKnown RBP12.24□□□□□ -0.45
CDH8-201ENST00000299345 IGLV1-36A0A0B4J1U3 117 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 M0R233 179 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 PNPP00491 289 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 HTR2CP28335 458 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 SCAND1P57086 179 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 RBMS2Q15434 407 aaKnown RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 VSX1Q9NZR4 365 aaPredicted RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 ASCC3Q8N3C0 2202 aaKnown RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 A0A1B0GTQ1 180 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ANKUB1A6NFN9 424 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 H3BMH7 237 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 H7C417 338 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 KDM4BO94953 1096 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 WISP1O95388 367 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 AKAIN1P0CW23 69 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 DCDP81605 110 aaKnown RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 SNTA1Q13424 505 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 TMEM225Q6GV28 225 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 OR11H4Q8NGC9 324 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ZNF768Q9H5H4 540 aaKnown RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 MTFP1Q9UDX5 166 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 OR52A1Q9UKL2 312 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 PCDH15Q96QU1 1955 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ERVH48-1M5A8F1 160 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 CTAG2O75638 210 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 DCNP07585 359 aaKnown RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 ITGA5P08648 1049 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 EFNB2P52799 333 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ACTBP60709 375 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ACTG1P63261 375 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 HSF1Q00613 529 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 PHF19Q5T6S3 580 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ZBTB37Q5TC79 503 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 TMEM244Q5VVB8 128 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 CORO6Q6QEF8 472 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 NLRC3Q7RTR2 1065 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ANKRD37Q7Z713 158 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 MCHR2Q969V1 340 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 DEFB126Q9BYW3 111 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 TTYH1Q9H313 450 aaPredicted RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 KCNK15Q9H427 330 aa12.23□□□□□ -0.45
CDH8-201ENST00000299345 TMA7Q9Y2S6 64 aaKnown RBP12.23□□□□□ -0.45
CDH8-201ENST00000299345 A0A1W2PPL8 197 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms