RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MEPCEQ7L2J0 689 aaKnown RBP18.54■□□□□ 0.56
SMCO4-201ENST00000298966 GTF2IRD2Q86UP8 949 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 IGFN1Q86VF2 1251 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 LSRQ86X29 649 aaPredicted RBP18.54■□□□□ 0.56
SMCO4-201ENST00000298966 CNEP1R1Q8N9A8 125 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 Q96M85 177 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 TSPAN32Q96QS1 320 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 RBM38Q9H0Z9 239 aaKnown RBP18.54■□□□□ 0.56
SMCO4-201ENST00000298966 CXorf56Q9H5V9 222 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 ELOVL5Q9NYP7 299 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 MOKQ9UQ07 419 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 ADAM18Q9Y3Q7 739 aa18.54■□□□□ 0.56
SMCO4-201ENST00000298966 TEX13CA0A0J9YWL9 993 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 A0A1W2PNR3 127 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 CENPBD1B2RD01 187 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 C11orf98E9PRG8 122 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 SEC14L2O76054 403 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 PAX1P15863 534 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 DCKP27707 260 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 SHC1P29353 583 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 UGT2B10P36537 528 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 RPS3AP61247 264 aaKnown RBP18.53■□□□□ 0.56
SMCO4-201ENST00000298966 FOXB2Q5VYV0 432 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 TMEM225Q6GV28 225 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 UEVLDQ8IX04 471 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 NPEPL1Q8NDH3 523 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 OR4K13Q8NH42 304 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 OR2V1Q8NHB1 315 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 FNDC8Q8TC99 324 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 TMEM158Q8WZ71 300 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 CPNE4Q96A23 557 aaPredicted RBP18.53■□□□□ 0.56
SMCO4-201ENST00000298966 STARD4Q96DR4 205 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 ZC3HAV1LQ96H79 300 aaKnown RBP18.53■□□□□ 0.56
SMCO4-201ENST00000298966 TMEM80Q96HE8 168 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 DDOQ99489 341 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 SF3B5Q9BWJ5 86 aaKnown RBP18.53■□□□□ 0.56
SMCO4-201ENST00000298966 FGF20Q9NP95 211 aaPredicted RBP18.53■□□□□ 0.56
SMCO4-201ENST00000298966 ACOT13Q9NPJ3 140 aa18.53■□□□□ 0.56
SMCO4-201ENST00000298966 ZNF346Q9UL40 294 aaKnown RBP18.53■□□□□ 0.56
SMCO4-201ENST00000298966 A0A0J9YW62 118 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 C16orf97H3BN30 126 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 TMCC2O75069 709 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 AKR7A3O95154 331 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 SLC2A10O95528 541 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 FADS2O95864 444 aaKnown RBP18.52■□□□□ 0.56
SMCO4-201ENST00000298966 TGM6O95932 706 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 BCL10O95999 233 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 NR2C1P13056 603 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 LHX2P50458 406 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 BLVRAP53004 296 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 ATP5J2P56134 94 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 TNK1Q13470 666 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 RAB39AQ14964 217 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 UBE2UQ5VVX9 321 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 HBMQ6B0K9 141 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 VWA1Q6PCB0 445 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 CHMP1BQ7LBR1 199 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 BCDIN3DQ7Z5W3 292 aaKnown RBP18.52■□□□□ 0.56
SMCO4-201ENST00000298966 GGNQ86UU5 652 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 TMEM99Q8N816 258 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 OR13F1Q8NGS4 319 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 OR2T4Q8NH00 348 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 ZNF519Q8TB69 540 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 RORBQ92753 470 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 ADGRG7Q96K78 797 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 ADAD1Q96M93 576 aaKnown RBP18.52■□□□□ 0.56
SMCO4-201ENST00000298966 NMNAT2Q9BZQ4 307 aa18.52■□□□□ 0.56
SMCO4-201ENST00000298966 ZNF701Q9NV72 531 aaPredicted RBP18.52■□□□□ 0.56
SMCO4-201ENST00000298966 DIMT1Q9UNQ2 313 aaKnown RBP18.52■□□□□ 0.56
SMCO4-201ENST00000298966 AKAP8O43823 692 aaKnown RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 ENPP1P22413 925 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 SLC2A5P22732 501 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 LOXP28300 417 aaPredicted RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 CCKARP32238 428 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 P2RY4P51582 365 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 CARD18P57730 90 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 PON3Q15166 354 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 LEG1Q6P5S2 330 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF474Q6S9Z5 364 aaPredicted RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 SLC35D2Q76EJ3 337 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 BTLAQ7Z6A9 289 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 SDR9C7Q8NEX9 313 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 IGFBPL1Q8WX77 278 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 PTP4A1Q93096 173 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 TMIGD2Q96BF3 282 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 DGCR14Q96DF8 476 aaKnown RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 RNFT2Q96EX2 444 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 MYCBPQ99417 103 aaPredicted RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 JAM3Q9BX67 310 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 RACGAP1Q9H0H5 632 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 OPN3Q9H1Y3 402 aaPredicted RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 SEC14L4Q9UDX3 406 aa18.51■□□□□ 0.55
SMCO4-201ENST00000298966 EXOGQ9Y2C4 368 aaKnown RBP18.51■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF99A8MXY4 864 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 EIF1AYO14602 144 aaKnown RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 RAB36O95755 333 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF708P17019 499 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF43P17038 809 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 C21orf33P30042 268 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 ACVR1BP36896 505 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms