RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SELENOIQ9C0D9 397 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 C1orf198Q9H425 327 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLAMF7Q9NQ25 335 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 KLF15Q9UIH9 416 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 FBXL4Q9UKA2 621 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 VDAC3Q9Y277 283 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 CORINQ9Y5Q5 1042 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 FAM227AF5H4B4 570 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 K7ESM1 405 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF593O00488 134 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 F13BP05160 661 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 DBHP09172 617 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 JMJD7P0C870 316 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CDKN3Q16667 212 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PYCR3Q53H96 274 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ADAM5Q6NVV9 412 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ADGRE4PQ86SQ3 457 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR14L1PQ8NHC6 308 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 C14orf79Q96F83 325 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PAPOLGQ9BWT3 736 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MS4A8Q9BY19 250 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 RAB22AQ9UL26 194 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ANKRD30BLA7E2S9 258 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 AIPO00170 330 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 YY2O15391 372 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF264O43296 627 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 SIGLEC6O43699 453 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 DDAH2O95865 285 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MT-ND4LP03901 98 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CALCBP10092 127 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MTHFD2P13995 350 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 SRMP19623 302 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ABHD5Q8WTS1 349 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MACROD1Q9BQ69 325 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PATZ1Q9HBE1 687 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MN1Q10571 1320 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MDFIC2A0A1B0GVS7 189 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CEBPZOSA8MTT3 80 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF195O14628 629 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 TNFSF12O43508 249 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 IRF2P14316 349 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 KITLGP21583 273 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 POU3F1Q03052 451 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 SNTB1Q13884 538 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 KANSL1Q7Z3B3 1105 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PRR22Q8IZ63 422 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MFSD9Q8NBP5 474 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 LKAAEAR1Q8TD35 194 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 UHRF2Q96PU4 802 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 LRIT1Q9P2V4 623 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 DOCK4Q8N1I0 1966 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 SPAG17Q6Q759 2223 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 ARGFXA6NJG6 315 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CEACAM5P06731 702 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CHRM2P08172 466 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CD14P08571 375 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CPEP16870 476 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 CPT2P23786 658 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PCBD1P61457 104 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 TNFRSF17Q02223 184 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 RFLNAQ6ZTI6 216 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 USP53Q70EK8 1073 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR5K2Q8NHB8 316 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MSI2Q96DH6 328 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 YIPF6Q96EC8 236 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PARD6AQ9NPB6 346 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 MRPS28Q9Y2Q9 187 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 GPR55Q9Y2T6 319 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 PCDHGA1Q9Y5H4 931 aa10.84□□□□□ -0.67
SYNGAP1-201ENST00000293748 THBS3P49746 956 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 FOXC1Q12948 553 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 FAM71E1Q6IPT2 247 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 WDR88Q6ZMY6 472 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 GDF7Q7Z4P5 450 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 LIX1LQ8IVB5 337 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 MCATQ8IVS2 390 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 IFI44Q8TCB0 444 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 SAP25Q8TEE9 199 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC39A9Q9NUM3 307 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 ACER3Q9NUN7 267 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 KIAA1549LQ6ZVL6 1849 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 THADAQ6YHU6 1953 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 A0A1B0GWA3 101 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF44P15621 663 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 GABRB1P18505 474 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 TAGLN2P37802 199 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 RFX2P48378 723 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 CLDN20P56880 219 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 BRICD5Q6PL45 260 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 BCDIN3DQ7Z5W3 292 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 RNF170Q96K19 258 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 AMDHD1Q96NU7 426 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 CRB3Q9BUF7 120 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 PRAMEF27A3QJZ7 478 aa10.83□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZAR1LA6NP61 321 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms