RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 VHLLQ6RSH7 139 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 CD300LDQ6UXZ3 194 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 AMIGO2Q86SJ2 522 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 IQCF1Q8N6M8 205 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 CYB561A3Q8NBI2 242 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 OR52E2Q8NGJ4 325 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 TMEM171Q8WVE6 324 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 LRTOMTQ8WZ04 291 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 PIGTQ969N2 578 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 DUS3LQ96G46 650 aaKnown RBP11.58□□□□□ -0.56
VPS28-201ENST00000292510 FOXC2Q99958 501 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 DHRS9Q9BPW9 319 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 SRA1Q9HD15 236 aaKnown RBP11.58□□□□□ -0.56
VPS28-201ENST00000292510 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.56
VPS28-201ENST00000292510 REV1Q9UBZ9 1251 aa11.58□□□□□ -0.56
VPS28-201ENST00000292510 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 OR6C68A6NDL8 312 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 FAM171A2A8MVW0 826 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 IDH3BO43837 385 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 SMPD2O60906 423 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 RENP00797 406 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 SERPINA5P05154 406 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 CST2P09228 141 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 MSR1P21757 451 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 FASP25445 335 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 TTKP33981 857 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 CDKN1AP38936 164 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 GUCA1AP43080 201 aaPredicted RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 CENPAP49450 140 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 ACTR3P61158 418 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS28-201ENST00000292510 COX10Q12887 443 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 PABPC1L2AQ5JQF8 200 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 KRT80Q6KB66 452 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 SHQ1Q6PI26 577 aaKnown RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 DPPA2Q7Z7J5 298 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 OR6V1Q8N148 313 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 MUC15Q8N387 334 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 PAQR4Q8N4S7 273 aaPredicted RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 ATG16L2Q8NAA4 619 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 NPEPL1Q8NDH3 523 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 AKR7LQ8NHP1 331 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 PYDC1Q8WXC3 89 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 PERPQ96FX8 193 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 ZNF416Q9BWM5 594 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 KCNN2Q9H2S1 579 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 CCNB1IP1Q9NPC3 277 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 CA10Q9NS85 328 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 BEX4Q9NWD9 120 aaPredicted RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 B9D1Q9UPM9 204 aa11.57□□□□□ -0.56
VPS28-201ENST00000292510 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
VPS28-201ENST00000292510 ARID1AO14497 2285 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 IGLV1-36A0A0B4J1U3 117 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 H3BN98 237 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 ZNF35P13682 527 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 APEX1P27695 318 aaKnown RBP11.56□□□□□ -0.56
VPS28-201ENST00000292510 POU1F1P28069 291 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 CRABP1P29762 137 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 ARHGDIAP52565 204 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 PSG4Q00888 419 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 HSF2Q03933 536 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 SNTB2Q13425 540 aaKnown RBP11.56□□□□□ -0.56
VPS28-201ENST00000292510 MEP1BQ16820 701 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 ZNF362Q5T0B9 420 aaPredicted RBP11.56□□□□□ -0.56
VPS28-201ENST00000292510 AGAP6Q5VW22 663 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 ZNF544Q6NX49 715 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 DTX2Q86UW9 622 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 GLB1L2Q8IW92 636 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 FBXL14Q8N1E6 418 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 LNX2Q8N448 690 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 CPEB3Q8NE35 698 aaKnown RBP11.56□□□□□ -0.56
VPS28-201ENST00000292510 SLC30A7Q8NEW0 376 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 OR2T33Q8NG76 320 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 OR4F15Q8NGB8 312 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 OR5K1Q8NHB7 308 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 TEX47Q8TBZ9 253 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 C11orf40Q8WZ69 217 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 DDOQ99489 341 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 OR2H1Q9GZK4 316 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 WNT5BQ9H1J7 359 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 CXXC4Q9H2H0 198 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 ZNF556Q9HAH1 456 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 FAIMQ9NVQ4 179 aa11.56□□□□□ -0.56
VPS28-201ENST00000292510 HIVEP1P15822 2718 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 GPRIN2O60269 458 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 GAAP10253 952 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 ANXA8P13928 327 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 NR4A1P22736 598 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 APOBEC3AP31941 199 aaPredicted RBP11.55□□□□□ -0.56
VPS28-201ENST00000292510 THBS4P35443 961 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 PTH2RP49190 550 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 DAPP51397 102 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 NKX6-1P78426 367 aaPredicted RBP11.55□□□□□ -0.56
VPS28-201ENST00000292510 PLP2Q04941 152 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 DAG1Q14118 895 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 CRMP1Q14194 572 aa11.55□□□□□ -0.56
VPS28-201ENST00000292510 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms