RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 LGI1O95970 557 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 ITGB7P26010 798 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 GSK3AP49840 483 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 PRDX1Q06830 199 aaKnown RBP9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.89□□□□□ -0.832e-6■■■■□ 21.1
PKNOX1-201ENST00000291547 TMEM182Q6ZP80 229 aaPredicted RBP9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 LINC00346Q8IVM7 164 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 EID2Q8N6I1 236 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 BPIFCQ8NFQ6 507 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 OR52N1Q8NH53 320 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 SEH1LQ96EE3 360 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 CASD1Q96PB1 797 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 POFUT1Q9H488 388 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 TMEM231Q9H6L2 316 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 TGOLN2O43493 480 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 CLDN2P57739 230 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 NTHL1P78549 312 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 EXOSC2Q13868 293 aaKnown RBP9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 YOD1Q5VVQ6 348 aaPredicted RBP9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 OR13C8Q8NGS7 320 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 STT3BQ8TCJ2 826 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 UBE2FQ969M7 185 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 DTD2Q96FN9 168 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 PDLIM5Q96HC4 596 aaKnown RBP9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF586Q9NXT0 402 aa9.89□□□□□ -0.83
PKNOX1-201ENST00000291547 BTBD17A6NE02 478 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF732B4DXR9 585 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 GFRA2O00451 464 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ZFAND5O76080 213 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 SRMP19623 302 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ELAVL4P26378 380 aaKnown RBP9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 CLEC9AQ6UXN8 241 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 Q6ZSR6 202 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 OVCH1Q7RTY7 1134 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 PTRH1Q86Y79 214 aaKnown RBP9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 TMEM123Q8N131 208 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 KIAA1958Q8N8K9 716 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 LMNTD1Q8N9Z9 388 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 KIRREL1Q96J84 757 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 MED18Q9BUE0 208 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 TMPRSS5Q9H3S3 457 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 TUBB1Q9H4B7 451 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 WDR90Q96KV7 1748 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 TRBV11-1A0A0K0K1C0 115 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 DCTN6O00399 190 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 MAN2B1O00754 1011 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 SUSD5O60279 629 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 CLDN17P56750 224 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 HAGHQ16775 308 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 CTSL3PQ5NE16 218 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 OPN5Q6U736 354 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 PRSS35Q8N3Z0 413 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 APH1BQ8WW43 257 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 SLC6A18Q96N87 628 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 NUDT19A8MXV4 375 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 DCAF7P61962 342 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF90Q03938 601 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 DEFB133Q30KQ1 61 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 C4orf17Q53FE4 359 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 AAED1Q7RTV5 226 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 SLIRPQ9GZT3 109 aaKnown RBP9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 NXT1Q9UKK6 140 aaKnown RBP9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF816-ZNF321PA0A0X1KG74 233 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 EFSO43281 561 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 OR2F2O95006 317 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 NKX2-1P43699 371 aaPredicted RBP9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 MLF1P58340 268 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 OR2F1Q13607 317 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 KDM4DQ6B0I6 523 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 GLIPR1L1Q6UWM5 242 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF321PQ8N8H1 164 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 OR5B3Q8NH48 314 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 PIGTQ969N2 578 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 TCTN2Q96GX1 697 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 ULBP3Q9BZM4 244 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 NKX2-4Q9H2Z4 354 aa9.88□□□□□ -0.83
PKNOX1-201ENST00000291547 KIR2DS5A0A0G2JLQ3 304 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 A0A0G2JNG1 304 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 A0A1B0GWA3 101 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF587BE7ETH6 402 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 K7EQM0 130 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 KIR2DS3K7RE56 304 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 ERVH48-1M5A8F1 160 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 LGALS8O00214 317 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 PHOX2AO14813 284 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 UBE2IP63279 158 aaKnown RBP9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 PMPCAQ10713 525 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 KIR2DS5Q14953 304 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 Q6ZSR9 355 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 NECAP1Q8NC96 275 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 FAM71CQ8NEG0 241 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 WDR83Q9BRX9 315 aaKnown RBP9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 FAM103A1Q9BTL3 118 aaKnown RBP9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 AK3Q9UIJ7 227 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 CSAG2Q9Y5P2 127 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 ZNF217O75362 1048 aa9.87□□□□□ -0.83
PKNOX1-201ENST00000291547 GLI4P10075 376 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms