RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GINS1Q14691 196 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF324BQ6AW86 544 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ABLIM2Q6H8Q1 611 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 PAQR6Q6TCH4 344 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 H1FNTQ75WM6 255 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 DPY19L4Q7Z388 723 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 PM20D2Q8IYS1 436 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 OR2T33Q8NG76 320 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 H1FXQ92522 213 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 CPNE4Q96A23 557 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 OR52D1Q9H346 318 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ZMIZ1Q9ULJ6 1067 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 CSAG2Q9Y5P2 127 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 LOC110117498-PIK3R3F6TDL0 507 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC1A7O00341 560 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 PLPP3O14495 311 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ARPC3O15145 178 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 PRH1P02810 166 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 GNRHRP30968 328 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 FAUP35544 74 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 RAC3P60763 192 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 HERV-K104P61576 105 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 SNRPGP62308 76 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 KLRB1Q12918 225 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 C6orf52Q5T4I8 152 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 UBE2UQ5VVX9 321 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC6A19Q695T7 634 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC27A4Q6P1M0 643 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 LHFPL3Q86UP9 236 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 UBL7Q96S82 380 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 DCLRE1CQ96SD1 692 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 HCAR1Q9BXC0 346 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 GP6Q9HCN6 339 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 TRGV5A0A0B4J1U4 118 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF670-ZNF695F2Z2N8 137 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 MITFO75030 526 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 IL11P20809 199 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GLP1RP43220 463 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 P2RY4P51582 365 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 LGALS4P56470 323 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 H3F3AP84243 136 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 POU3F1Q03052 451 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 PGGHGQ32M88 737 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GPR139Q6DWJ6 353 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 MZT2BQ6NZ67 158 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 PLET1Q6UQ28 207 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 TMEM200AQ86VY9 491 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 KDM8Q8N371 416 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 LRRC18Q8N456 261 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 OR52E2Q8NGJ4 325 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 OR13C2Q8NGS9 318 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GPR137Q96N19 417 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 BEX2Q9BXY8 128 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ACTR6Q9GZN1 396 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 DNTTIP1Q9H147 329 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 BEX1Q9HBH7 125 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 DIABLOQ9NR28 239 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GPR160Q9UJ42 338 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF175Q9Y473 711 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 PCDHGB1Q9Y5G3 927 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ZC3H12DA2A288 527 aaKnown RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 CCRL2O00421 344 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 TMEM11P17152 192 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 PTGER4P35408 488 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 DAP3P51398 398 aaKnown RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 AP2S1P53680 142 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GNB2P62879 340 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 LTBQ06643 244 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 WIPI1Q5MNZ9 446 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC22A25Q6T423 547 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ANKK1Q8NFD2 765 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 OR5M1Q8NGP8 315 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 CASTOR1Q8WTX7 329 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 IL1F10Q8WWZ1 152 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GATAD2BQ8WXI9 593 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 NPAS1Q99742 590 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 YTHDF1Q9BYJ9 559 aaKnown RBP7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 NRIP3Q9NQ35 241 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 GSKIPQ9P0R6 139 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ACVR1BP36896 505 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 DIO1P49895 249 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 EFNB1P98172 346 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 HES1Q14469 280 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 HBMQ6B0K9 141 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ZPLD1Q8TCW7 415 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 CA5BP1Q8WTZ4 195 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF566Q969W8 418 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 MOGAT1Q96PD6 335 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC5A7Q9GZV3 580 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 OR10A4Q9H209 315 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 FBXL3Q9UKT7 428 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 SESN1Q9Y6P5 492 aa7.53□□□□□ -1.2
PTPDC1-201ENST00000288976 TVP23AA6NH52 213 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 WISP1O95388 367 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 HOXD4P09016 255 aaPredicted RBP7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 FCGR2AP12318 317 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 RAD52P43351 418 aa7.52□□□□□ -1.2
PTPDC1-201ENST00000288976 CSNK1A1P48729 337 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms