RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 LIMK1P53667 647 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 AKR1C1Q04828 323 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 MESTQ5EB52 335 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 TSSK4Q6SA08 328 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 SPERTQ8NA61 448 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 DCBLD2Q96PD2 775 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 CA10Q9NS85 328 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 TRBV11-1A0A0K0K1C0 115 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 PRAF2O60831 178 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 CFDP00746 253 aaPredicted RBP14.38□□□□□ -0.11
SMAD6-201ENST00000288840 CTLA4P16410 223 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 ZC3HAV1LQ96H79 300 aaKnown RBP14.38□□□□□ -0.11
SMAD6-201ENST00000288840 KCNJ15Q99712 375 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 ST6GALNAC5Q9BVH7 336 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 GSX2Q9BZM3 304 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 GHITMQ9H3K2 345 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF701Q9NV72 531 aaPredicted RBP14.38□□□□□ -0.11
SMAD6-201ENST00000288840 FOXJ3Q9UPW0 622 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 TMEM82A0PJX8 343 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 PI3P19957 117 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 FAM219AQ8IW50 185 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 THAP6Q8TBB0 222 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 NUDCD2Q8WVJ2 157 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 ABHD6Q9BV23 337 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 DEFB126Q9BYW3 111 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 NARFLQ9H6Q4 476 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 PCOLCE2Q9UKZ9 415 aa14.38□□□□□ -0.11
SMAD6-201ENST00000288840 CSF1P09603 554 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 SLC6A8P48029 635 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 UBE2IP63279 158 aaKnown RBP14.37□□□□□ -0.11
SMAD6-201ENST00000288840 HSD11B2P80365 405 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 C12orf45Q8N5I9 185 aaPredicted RBP14.37□□□□□ -0.11
SMAD6-201ENST00000288840 OR51A2Q8NGJ7 313 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 SCMH1Q96GD3 660 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 TINAGL1Q9GZM7 467 aaPredicted RBP14.37□□□□□ -0.11
SMAD6-201ENST00000288840 BANF2Q9H503 90 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 CLEC1BQ9P126 229 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 ARPC3O15145 178 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 CD53P19397 219 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 ACTBP60709 375 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 RPL27P61353 136 aaKnown RBP14.37□□□□□ -0.11
SMAD6-201ENST00000288840 ACTG1P63261 375 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 CEBPEQ15744 281 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 LSMEM1Q8N8F7 131 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 HAVCR1Q96D42 359 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 CRB3Q9BUF7 120 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 POFUT1Q9H488 388 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF576Q9H609 170 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 SERINC1Q9NRX5 453 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 B3GNT2Q9NY97 397 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 TAS2R8Q9NYW2 309 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 A0A0G2JK05 382 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF432O94892 652 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 SFTPBP07988 381 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 HLA-DOBP13765 273 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 FOLR1P15328 257 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 RAP2BP61225 183 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 RAB12Q6IQ22 244 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 C3orf33Q6P1S2 294 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 STEAP2Q8NFT2 490 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 MIB2Q96AX9 1013 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF649Q9BS31 505 aa14.37□□□□□ -0.11
SMAD6-201ENST00000288840 CHMP1AQ9HD42 196 aaPredicted RBP14.37□□□□□ -0.11
SMAD6-201ENST00000288840 CNOT1A5YKK6 2376 aaKnown RBP14.37□□□□□ -0.11
SMAD6-201ENST00000288840 FAM221BA6H8Z2 402 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 SCGB1D2O95969 90 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 F10P00742 488 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 KNG1P01042 644 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 HACD4Q5VWC8 232 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 LAMTOR1Q6IAA8 161 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 UNQ6126/PRO20091Q6UXV3 157 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 TMEM156Q8N614 296 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 WDR89Q96FK6 387 aaPredicted RBP14.36□□□□□ -0.11
SMAD6-201ENST00000288840 SLC41A2Q96JW4 573 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 CHST6Q9GZX3 395 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 ANKRD10Q9NXR5 420 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 PRSS37A4D1T9 235 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 GGT3PA6NGU5 568 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 PRR32B1ATL7 298 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 DISC1C4P0D8 188 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 CRABP1P29762 137 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 IL13RA1P78552 427 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 TNK1Q13470 666 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 DYRK1AQ13627 763 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF141Q15928 474 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 OR52W1Q6IF63 320 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 CMIPQ8IY22 773 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 ARL5BQ96KC2 179 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 SLC6A15Q9H2J7 730 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 LOC107986453A0A1B0GWG9 222 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 SEC14L5O43304 696 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 OR2T1O43869 369 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 HLA-DQB1P01920 261 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 ITGA3P26006 1051 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 ABCD3P28288 659 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 EMP2P54851 167 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 PDZD9Q8IXQ8 264 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 LRRC18Q8N456 261 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms