RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ARPC3O15145 178 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 IDH3BO43837 385 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 AHCYL1O43865 530 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 DOK2O60496 412 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 MPZL1O95297 269 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 GPANK1O95872 356 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 TXNDC12O95881 172 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 IGLV1-44P01699 117 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 GYPBP06028 91 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 LCKP06239 509 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 SOD3P08294 240 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR4A8P0C604 315 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 BMP4P12644 408 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OSMP13725 252 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ZNF823P16415 610 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ZNF14P17017 642 aaPredicted RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 CD53P19397 219 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 PAICSP22234 425 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 PYCR1P32322 319 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 HTR5AP47898 357 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 GDI2P50395 445 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 ACTR3P61158 418 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 RPS7P62081 194 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 SNRPD2P62316 118 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 GLO1Q04760 184 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 SCRN3Q0VDG4 424 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 COX10Q12887 443 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 CRMP1Q14194 572 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 GINS1Q14691 196 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 MEP1BQ16820 701 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 PGGHGQ32M88 737 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 NRN1LQ496H8 165 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 FAM27BQ5VT28 67 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 SLC27A4Q6P1M0 643 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 TMEM154Q6P9G4 183 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 UGT2A3Q6UWM9 527 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ZNF627Q7L945 461 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 HIPK1Q86Z02 1210 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 C10orf67Q8IYJ2 551 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ALDH16A1Q8IZ83 802 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 MUC15Q8N387 334 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 FAM169BQ8N8A8 192 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 IL17RDQ8NFM7 739 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR4F15Q8NGB8 312 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR51L1Q8NGJ5 315 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR1J2Q8NGS2 313 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR6K6Q8NGW6 343 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR2AJ1Q8NGZ0 328 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR2T4Q8NH00 348 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 OR4Q3Q8NH05 313 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 LILRB1Q8NHL6 650 aaPredicted RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 NABP1Q96AH0 204 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 NMD3Q96D46 503 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 TRMT61AQ96FX7 289 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 BOD1Q96IK1 185 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ZNF416Q9BWM5 594 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 CDADC1Q9BWV3 514 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 CACNG6Q9BXT2 260 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 C1orf198Q9H425 327 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 DYNLRB1Q9NP97 96 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 CA10Q9NS85 328 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 BEX4Q9NWD9 120 aaPredicted RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 B3GNT2Q9NY97 397 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 PLEK2Q9NYT0 353 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 IL20Q9NYY1 176 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 VSX1Q9NZR4 365 aaPredicted RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 CRNNQ9UBG3 495 aaPredicted RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 ASH2LQ9UBL3 628 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 KLHL21Q9UJP4 597 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 TIMM10BQ9Y5J6 103 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 PTPN13Q12923 2485 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 SPTAN1Q13813 2472 aaKnown RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 A0A1W2PPW3 197 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 OR6C68A6NDL8 312 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 TVP23AA6NH52 213 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 FAM183AA6NL82 134 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ANKRD65E5RJM6 399 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 DCTN6O00399 190 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 SGCEO43556 437 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 GPRIN2O60269 458 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 MGRN1O60291 552 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 BAG2O95816 211 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 SERPINA5P05154 406 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 CST2P09228 141 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 SPARCP09486 303 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 IGFBP5P24593 272 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 STOMP27105 288 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 APOBEC3AP31941 199 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 TTKP33981 857 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 GRK5P34947 590 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 THBS4P35443 961 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 PTH2RP49190 550 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ZNF133P52736 654 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 ATP5J2P56134 94 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 RPS23P62266 143 aaKnown RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 ADAM8P78325 824 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 NKX6-1P78426 367 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 PSG4Q00888 419 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 TEKQ02763 1124 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms