RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 DNASE1L1P49184 302 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 RNF4P78317 190 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 SLC17A1Q14916 467 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 ADAM19Q9H013 955 aa14.95□□□□□ -0.02
VPS54-201ENST00000272322 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.95□□□□□ -0.02
VPS54-201ENST00000272322 RP1L1Q8IWN7 2480 aaPredicted RBP14.95□□□□□ -0.02
VPS54-201ENST00000272322 GVINP1Q7Z2Y8 2422 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 NPIPA5E9PKD4 350 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 BCAT2O15382 392 aaPredicted RBP14.94□□□□□ -0.02
VPS54-201ENST00000272322 HEXBP07686 556 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 PER3P56645 1201 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 PRSS12P56730 875 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 TLE3Q04726 772 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 SLC18B1Q6NT16 456 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 TEX261Q6UWH6 196 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 FAM219AQ8IW50 185 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 TDHQ8IZJ6 230 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 MIB2Q96AX9 1013 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 NPIPA1Q9UND3 350 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 MOKQ9UQ07 419 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 U3KQ87 197 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 LOC400499M0QZD8 3231 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 TRBV11-1A0A0K0K1C0 115 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 TMEM269A0A1B0GVZ9 245 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 NXPH1P58417 271 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 EXOSC2Q13868 293 aaKnown RBP14.94□□□□□ -0.02
VPS54-201ENST00000272322 CD276Q5ZPR3 534 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 GUSBP11Q6P575 273 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 JSRP1Q96MG2 331 aaPredicted RBP14.94□□□□□ -0.02
VPS54-201ENST00000272322 SOX7Q9BT81 388 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 RANBP3Q9H6Z4 567 aaPredicted RBP14.94□□□□□ -0.02
VPS54-201ENST00000272322 TEX51A0A1B0GUA7 166 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 A0A1B0GX78 115 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 A0A1W2PPL8 197 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 TMEM235A6NFC5 223 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 ZSCAN5BA6NJL1 495 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 MOGAT2Q3SYC2 334 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 SLC22A6Q4U2R8 563 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 ZBTB37Q5TC79 503 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 ALKAL2Q6UX46 152 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 CREB3L2Q70SY1 520 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 RNF144BQ7Z419 303 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 OR13C3Q8NGS6 347 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 EMC7Q9NPA0 242 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 GPR27Q9NS67 375 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 FBXO4Q9UKT5 387 aa14.94□□□□□ -0.02
VPS54-201ENST00000272322 ALG1L2C9J202 215 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 BEX5Q5H9J7 111 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 OR1J4Q8NGS1 313 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 NPRL2Q8WTW4 380 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 SLC39A7Q92504 469 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 EXO5Q9H790 373 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 MYO7BQ6PIF6 2116 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 SLC22A23A1A5C7 686 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 ACOT7O00154 380 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 TRIM3O75382 744 aaPredicted RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 CELA2AP08217 269 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 MAPK3P27361 379 aaPredicted RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 RIDAP52758 137 aaKnown RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 SLC25A1P53007 311 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 ASPHD2Q6ICH7 369 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 NAXEQ8NCW5 288 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 ZNF578Q96N58 590 aaPredicted RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 OR8B4Q96RC9 309 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 GPX7Q96SL4 187 aaPredicted RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 PHF7Q9BWX1 381 aaPredicted RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 STEAP1Q9UHE8 339 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 MRPS18BQ9Y676 258 aaKnown RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 SPTBN2O15020 2390 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 IGKV3D-11A0A0A0MRZ8 115 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 TSPAN2O60636 221 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 CTAG2O75638 210 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 VSIG10L2P0DP72 767 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 BIDP55957 195 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 HSF2Q03933 536 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 FOXF1Q12946 379 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 PHF19Q5T6S3 580 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 PAPD4Q6PIY7 484 aaKnown RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 MSANTD3Q96H12 275 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 TINAGL1Q9GZM7 467 aaPredicted RBP14.93□□□□□ -0.02
VPS54-201ENST00000272322 DIABLOQ9NR28 239 aa14.93□□□□□ -0.02
VPS54-201ENST00000272322 TMEM212A6NML5 194 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 A8MVM7 634 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 FAM25EA8MYX2 175 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 M0R233 179 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 GOSR2O14653 212 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 SLC22A5O76082 557 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 RAF1P04049 648 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 GLO1Q04760 184 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 IL10RAQ13651 578 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 RAB11BQ15907 218 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 LCN10Q6JVE6 187 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 RFPL4BQ6ZWI9 263 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 ZNF679Q8IYX0 411 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 FGGYQ96C11 551 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 ZNF224Q9NZL3 707 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 SULT1A3P0DMM9 295 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 SULT1A4P0DMN0 295 aa14.92□□□□□ -0.02
VPS54-201ENST00000272322 POLR2HP52434 150 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms