RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 BEX5Q5H9J7 111 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 CLVS2Q5SYC1 327 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 SMAP2Q8WU79 429 aaPredicted RBP12.75□□□□□ -0.37
CDH3-201ENST00000264012 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TRAPPC2LQ9UL33 140 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 B8ZZF3 427 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 F8W036 122 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 AGPAT2O15120 278 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ZNF254O75437 659 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 UBBP0CG47 229 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ELK1P19419 428 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ETV6P41212 452 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
CDH3-201ENST00000264012 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 POU4F3Q15319 338 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 TMEM68Q96MH6 324 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 OR2A5Q96R48 311 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 GABRG3Q99928 467 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 PRSS37A4D1T9 235 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 SULT1C4O75897 302 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 S100PP25815 95 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 DDOSTP39656 456 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ZNF169Q14929 603 aaPredicted RBP12.74□□□□□ -0.37
CDH3-201ENST00000264012 FCN2Q15485 313 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 FCRL1Q96LA6 429 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ZNF649Q9BS31 505 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ZNF436Q9C0F3 470 aaPredicted RBP12.74□□□□□ -0.37
CDH3-201ENST00000264012 CTSFQ9UBX1 484 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 B3GALT5Q9Y2C3 310 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 RAB5BP61020 215 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 CCL7P80098 99 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 BDH1Q02338 343 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 FBXW12Q6X9E4 464 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 DOK3Q7L591 496 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 TMEM185AQ8NFB2 350 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 GPBAR1Q8TDU6 330 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 PLA2G12AQ9BZM1 189 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 TXNIPQ9H3M7 391 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 SLC22A11Q9NSA0 550 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 SIRT5Q9NXA8 310 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 TPOP07202 933 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 POU2F2P09086 479 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 TAS2R4Q9NYW5 299 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 LRFN1Q9P244 771 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 WNT16Q9UBV4 365 aa12.74□□□□□ -0.37
CDH3-201ENST00000264012 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 CD53P19397 219 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 TIAL1Q01085 375 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDH3-201ENST00000264012 FABP5Q01469 135 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 RAB31Q13636 194 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 THEM4Q5T1C6 240 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 FGF20Q9NP95 211 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 FABP7O15540 132 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 TPBGQ13641 420 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 RDH10Q8IZV5 341 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ZNF681Q96N22 645 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ARRDC1-AS1Q9H2J1 176 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 GLTPQ9NZD2 209 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 PCDHGA5Q9Y5G8 931 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 FITM1A5D6W6 292 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ARGFXA6NJG6 315 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 E9PI62 339 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 NKX2-2O95096 273 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 CHRM2P08172 466 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 MSL3P1P0C860 447 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 CALCBP10092 127 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 SOX18P35713 384 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 PCBP4P57723 403 aaKnown RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 CDC20Q12834 499 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 PRSS41Q7RTY9 318 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ZADH2Q8N4Q0 377 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 OR13C5Q8NGS8 318 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 OR51E1Q8TCB6 317 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 TTC9Q92623 222 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 SMIM19Q96E16 107 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 YIPF6Q96EC8 236 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 OCSTAMPQ9BR26 566 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 MENTQ9BUN1 341 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ANKRD61A6NGH8 418 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 GPR137BO60478 399 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ZNF780AO75290 641 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 CDK5R1Q15078 307 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 PLGLAQ15195 96 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 NAXDQ8IW45 347 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 SEMA6DQ8NFY4 1073 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 MAFAQ8NHW3 353 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 SECTM1Q8WVN6 248 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.73□□□□□ -0.37
CDH3-201ENST00000264012 IP6K3Q96PC2 410 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 DUSP13Q9UII6 198 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms