RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 LYRM4Q9HD34 91 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 SLC22A11Q9NSA0 550 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 PKD1L3Q7Z443 1732 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 TCRBV5S1A1TA0A578 114 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 SOX15O60248 233 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 ALPLP05186 524 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 C7orf72A4D263 438 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 GAPDHSO14556 408 aaPredicted RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 DSCR3O14972 297 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 CYB5BO43169 146 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 MED6O75586 246 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 MMP11P24347 488 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 MEF2DQ14814 521 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 YIF1BQ5BJH7 314 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 YOD1Q5VVQ6 348 aaPredicted RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 ANGPTL5Q86XS5 388 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 FBXO17Q96EF6 278 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 ZNF75AQ96N20 296 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 B4GALT1P15291 398 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 EBPQ15125 230 aaKnown RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 RNF151Q2KHN1 245 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 RPL27P61353 136 aaKnown RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 MLLT11Q13015 90 aaPredicted RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 NLRC3Q7RTR2 1065 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 TMEM179BQ7Z7N9 219 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 OR56B1Q8NGI3 324 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
SPG11-201ENST00000261866 SDF2Q99470 211 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 FBXL2Q9UKC9 423 aa11.12□□□□□ -0.63
SPG11-201ENST00000261866 hCG_1809904A0A1W2PP81 198 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 A0A1W2PPE2 198 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 A0A1W2PR64 198 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 OR6C65A6NJZ3 312 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 SEMA6DQ8NFY4 1073 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 NRIP3Q9NQ35 241 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 GFYI3L273 518 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 CHEK1O14757 476 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 CHRNB1P11230 501 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 GJC3Q8NFK1 279 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 OR10X1Q8NGY0 326 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 SPNS1Q9H2V7 528 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 KIF25Q9UIL4 384 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 ETHE1O95571 254 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 SEMG1P04279 462 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 BRICD5Q6PL45 260 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 COPS3Q9UNS2 423 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 MOKQ9UQ07 419 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 KLF13Q9Y2Y9 288 aaPredicted RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 HIST1H1CP16403 213 aaKnown RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 CCR5P51681 352 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 ANKRD9Q96BM1 317 aaPredicted RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 SPRY3O43610 288 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 OR2T7P0C7T2 308 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 CCR6P51684 374 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 CPNE4Q96A23 557 aaPredicted RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 ERVMER34-1Q9H9K5 563 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 ANKRD36CQ5JPF3 1778 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 TEX51A0A1B0GUA7 166 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 METTL12A8MUP2 240 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 COL9A1P20849 921 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 TBXA2RP21731 343 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 MAP2K6P52564 334 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 TAS2R46P59540 309 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 Q6ZNB5 142 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 C16orf47Q6ZP98 133 aaPredicted RBP11.11□□□□□ -0.63
SPG11-201ENST00000261866 DNAJC22Q8N4W6 341 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 TCTEX1D2Q8WW35 142 aa11.11□□□□□ -0.63
SPG11-201ENST00000261866 XRCC3O43542 346 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 POU3F3P20264 500 aaPredicted RBP11.1□□□□□ -0.63
SPG11-201ENST00000261866 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
SPG11-201ENST00000261866 CATR1Q13166 79 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 GPR176Q14439 515 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 EGLN1Q9GZT9 426 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 PATZ1Q9HBE1 687 aaKnown RBP11.1□□□□□ -0.63
SPG11-201ENST00000261866 INPP5EQ9NRR6 644 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 SLC22A20A6NK97 555 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 ZNF728P0DKX0 622 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 TRPM3Q9HCF6 1732 aaPredicted RBP11.1□□□□□ -0.63
SPG11-201ENST00000261866 FITM1A5D6W6 292 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 PPM1DO15297 605 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 ADAM23O75077 832 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 CD14P08571 375 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 OR1C1Q15619 314 aa11.1□□□□□ -0.63
SPG11-201ENST00000261866 WIPI1Q5MNZ9 446 aaPredicted RBP11.1□□□□□ -0.63
SPG11-201ENST00000261866 OR11G2Q8NGC1 345 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms