RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ADAM10O14672 748 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 B3GALT4O96024 378 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 MT-ND4LP03901 98 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 GLI4P10075 376 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 CD1CP29017 333 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 HTR1FP30939 366 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 PRTGQ2VWP7 1150 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 MFSD12Q6NUT3 480 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
CUX2-201ENST00000261726 ZFPM2Q8WW38 1151 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 PSD2Q9BQI7 771 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 ZNF416Q9BWM5 594 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 ZNF724A8MTY0 619 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 SIRPB1O00241 398 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 GUSBP08236 651 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 TACR1P25103 407 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 CSNK1DP48730 415 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 Q1RN00 199 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 GJC3Q8NFK1 279 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 SLC46A1Q96NT5 459 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 ARPC3O15145 178 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 POLR2IP36954 125 aaKnown RBP13.12□□□□□ -0.31
CUX2-201ENST00000261726 YPEL5P62699 121 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 SPRED3Q2MJR0 410 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 YRDCQ86U90 279 aaKnown RBP13.12□□□□□ -0.31
CUX2-201ENST00000261726 SOX7Q9BT81 388 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 EMC6Q9BV81 110 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 FURINP09958 794 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 HAGHQ16775 308 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 SLC35A4Q96G79 324 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 GLIPR2Q9H4G4 154 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 OR6C68A6NDL8 312 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 DFFBO76075 338 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 CLEC2LP0C7M8 214 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 OR1M1Q8NGA1 313 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 APH1BQ8WW43 257 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 OR5M11Q96RB7 305 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 P2RY12Q9H244 342 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 GMPR2Q9P2T1 348 aaKnown RBP13.12□□□□□ -0.31
CUX2-201ENST00000261726 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 UGT2A1Q9Y4X1 527 aa13.12□□□□□ -0.31
CUX2-201ENST00000261726 M0R1B8 84 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 UBL3O95164 117 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 S100A11P31949 105 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 EIF2DP41214 584 aaKnown RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 EIF1P41567 113 aaKnown RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 KIAA1024LP59773 190 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 BTNL8Q6UX41 500 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 PSORS1C1Q9UIG5 152 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 NTNG1Q9Y2I2 539 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 A3GALT2U3KPV4 340 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 ADAM12O43184 909 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 KIAA0141Q14154 515 aaPredicted RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 TOR2AQ5JU69 321 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 MORN1Q5T089 497 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 OR51S1Q8NGJ8 323 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 C11orf40Q8WZ69 217 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 MBOAT4Q96T53 435 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 C11orf54Q9H0W9 315 aaPredicted RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 PTTG3PQ9NZH4 202 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 AK3Q9UIJ7 227 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 PADI1Q9ULC6 663 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 CCL26Q9Y258 94 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 HENMT1Q5T8I9 393 aaKnown RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 C2CD4CQ8TF44 421 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 TM4SF18Q96CE8 201 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 OR5I1Q13606 314 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 HSF5Q4G112 596 aaPredicted RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 SPANXN5Q5MJ07 72 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
CUX2-201ENST00000261726 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 OR4F5Q8NH21 305 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 AKR1E2Q96JD6 320 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 SLCO5A1Q9H2Y9 848 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 BCORQ6W2J9 1755 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 TRIM23P36406 574 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 ECI1P42126 302 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 REEP5Q00765 189 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 C11orf42Q8N5U0 333 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 NKAIN3Q8N8D7 197 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 GATA6Q92908 595 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 TRIB1Q96RU8 372 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 ATF6BQ99941 703 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 TAS2R4Q9NYW5 299 aa13.11□□□□□ -0.31
CUX2-201ENST00000261726 FITM1A5D6W6 292 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 SSSCA1O60232 199 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ALOX12BO75342 701 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 OR2C1O95371 312 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 PMS2P2O95744 297 aa13.1□□□□□ -0.31
CUX2-201ENST00000261726 ATXN1LP0C7T5 689 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms